RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 ZDHHC21Q8IVQ6 265 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 FITM2Q8N6M3 262 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 OR4C15Q8NGM1 316 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 OR2T4Q8NH00 348 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 MMADHCQ9H3L0 296 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-208ENST00000493601 EGLN3Q9H6Z9 239 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 UNKLQ9H9P5 680 aaKnown RBP13.86□□□□□ -0.19
PTPRU-208ENST00000493601 UFSP2Q9NUQ7 469 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 CD300AQ9UGN4 299 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 CDH10Q9Y6N8 788 aa13.86□□□□□ -0.19
PTPRU-208ENST00000493601 CD300LBA8K4G0 201 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 SNX3O60493 162 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 GMDSO60547 372 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 CA6P23280 308 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 PYCR1P32322 319 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 BPIFB3P59826 476 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 MPPED2Q15777 294 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 SNAI3Q3KNW1 292 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 SPATS1Q496A3 300 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 PRAMEF6Q5VXH4 476 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 DRAM2Q6UX65 266 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 LINC00471Q8N535 108 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 PLPP7Q8NBV4 271 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 OR10S1Q8NGN2 331 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 TECTBQ96PL2 329 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 TRIM36Q9NQ86 728 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 NDE1Q9NXR1 346 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 MRPL15Q9P015 296 aaKnown RBP13.85□□□□□ -0.19
PTPRU-208ENST00000493601 KIF17Q9P2E2 1029 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 RNF7Q9UBF6 113 aa13.85□□□□□ -0.19
PTPRU-208ENST00000493601 GGT3PA6NGU5 568 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 POM121CA8CG34 1229 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 BHLHE40O14503 412 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 WIPF1O43516 503 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 OTX1P32242 354 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-208ENST00000493601 MSX2P35548 267 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-208ENST00000493601 PSMB10P40306 273 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 FGF12P61328 243 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 ZNF92Q03936 586 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 GPR157Q5UAW9 335 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 CD276Q5ZPR3 534 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 LYPD2Q6UXB3 125 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 ZNF841Q6ZN19 808 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 CPLX4Q7Z7G2 160 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 CYB561A3Q8NBI2 242 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 C19orf18Q8NEA5 215 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 CDRT15Q96T59 188 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 COPS4Q9BT78 406 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 OPA3Q9H6K4 179 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 LYVE1Q9Y5Y7 322 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 COMMD3-BMI1R4GMX3 469 aa13.84□□□□□ -0.19
PTPRU-208ENST00000493601 C22orf46C9J442 243 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 LGALS8O00214 317 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 PTBP3O95758 552 aaKnown RBP13.83□□□□□ -0.2
PTPRU-208ENST00000493601 RPS27P42677 84 aaKnown RBP13.83□□□□□ -0.2
PTPRU-208ENST00000493601 MZT1Q08AG7 82 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 GLYATL3Q5SZD4 288 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 BRD3OSQ6XYD6 125 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 SPATC1Q76KD6 591 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 DCXRQ7Z4W1 244 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 OR9Q2Q8NGE9 314 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 OR2AE1Q8NHA4 323 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 BTBD10Q9BSF8 475 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 TBC1D23Q9NUY8 699 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 IL20Q9NYY1 176 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 ERVK-18Q9QC07 812 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 TAGLN3Q9UI15 199 aa13.83□□□□□ -0.2
PTPRU-208ENST00000493601 SOX21Q9Y651 276 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-208ENST00000493601 TRAV38-1A0A0B4J264 116 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-208ENST00000493601 MDFIC2A0A1B0GVS7 189 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 TVP23AA6NH52 213 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 TNFRSF11BO00300 401 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 HOXA3O43365 443 aaPredicted RBP13.82□□□□□ -0.2
PTPRU-208ENST00000493601 LIPFP07098 398 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 SPARCP09486 303 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 HMGA2P52926 109 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 TAF13Q15543 124 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 OR8B8Q15620 311 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 C16orf87Q6PH81 154 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 RASSF6Q6ZTQ3 369 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 BOLLQ8N9W6 283 aaKnown RBP13.82□□□□□ -0.2
PTPRU-208ENST00000493601 SPERTQ8NA61 448 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 ZDHHC16Q969W1 377 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 DDOQ99489 341 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 TRIM15Q9C019 465 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 PRDM13Q9H4Q3 707 aa13.82□□□□□ -0.2
PTPRU-208ENST00000493601 OOEPA6NGQ2 149 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 SRRM5B3KS81 715 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 ZNF878C9JN71 531 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 C3orf80F5H4A9 247 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 XRCC2O43543 280 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 NDUFA2O43678 99 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 PSKH1P11801 424 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 FMO3P31513 532 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 ENTPD1P49961 510 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 MXRA7P84157 204 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 DEFB112Q30KQ8 113 aa13.81□□□□□ -0.2
PTPRU-208ENST00000493601 SFRP4Q6FHJ7 346 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms