RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 GCDHQ92947 438 aaPredicted RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 POP5Q969H6 163 aaKnown RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 CCDC124Q96CT7 223 aaKnown RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 LRGUKQ96M69 825 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 DMRTB1Q96MA1 342 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 RBM4Q9BWF3 364 aaKnown RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 SSBP3Q9BWW4 388 aaPredicted RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 DGCR6LQ9BY27 220 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 TMEM165Q9HC07 324 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 DDX28Q9NUL7 540 aaKnown RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 ARMC1Q9NVT9 282 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 VNN3Q9NY84 501 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 PRPF19Q9UMS4 504 aaKnown RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 NOP16Q9Y3C1 178 aaKnown RBP6.93□□□□□ -1.3
LSM2-213ENST00000491421 INSIG2Q9Y5U4 225 aa6.93□□□□□ -1.3
LSM2-213ENST00000491421 TENM1Q9UKZ4 2725 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 GGT3PA6NGU5 568 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 CD300LBA8K4G0 201 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 ZNF593O00488 134 aaPredicted RBP6.92□□□□□ -1.3
LSM2-213ENST00000491421 FAM20BO75063 409 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 FSTL3O95633 263 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 WNT2P09544 360 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 RAP2AP10114 183 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 PSKH1P11801 424 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 SPI1P17947 270 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 CA6P23280 308 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 OTX1P32242 354 aaPredicted RBP6.92□□□□□ -1.3
LSM2-213ENST00000491421 PMELP40967 661 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 CD200P41217 278 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 ENTPD1P49961 510 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 PRKXP51817 358 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 SLC25A1P53007 311 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 GNB2P62879 340 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 ZNF92Q03936 586 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 MAB21L1Q13394 359 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 SNAI3Q3KNW1 292 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 ZNF404Q494X3 552 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 FAM201AQ5SY85 155 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 GLYATL3Q5SZD4 288 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 LCE2DQ5TA82 110 aaPredicted RBP6.92□□□□□ -1.3
LSM2-213ENST00000491421 PRAMEF6Q5VXH4 476 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 DRAM2Q6UX65 266 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 BTNL3Q6UXE8 466 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 RBMS3Q6XE24 437 aaKnown RBP6.92□□□□□ -1.3
LSM2-213ENST00000491421 SPATC1Q76KD6 591 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 NLRC3Q7RTR2 1065 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 ZNF511Q8NB15 262 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 PLPP7Q8NBV4 271 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 OR10G2Q8NGC3 310 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 OR8B3Q8NGG8 313 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 OR6K6Q8NGW6 343 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 OR4Q3Q8NH05 313 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 OR2AE1Q8NHA4 323 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 TEX47Q8TBZ9 253 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 Q8TCH9 128 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 DVL3Q92997 716 aaPredicted RBP6.92□□□□□ -1.3
LSM2-213ENST00000491421 ERGIC1Q969X5 290 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 SLAMF6Q96DU3 332 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 ASB9Q96DX5 294 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 NEIL1Q96FI4 390 aaPredicted RBP6.92□□□□□ -1.3
LSM2-213ENST00000491421 PLEKHA8Q96JA3 519 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 OR8B2Q96RD0 313 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 CITED4Q96RK1 184 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 TMEM246Q9BRR3 403 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 ADAT1Q9BUB4 502 aaKnown RBP6.92□□□□□ -1.3
LSM2-213ENST00000491421 NMNAT2Q9BZQ4 307 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 SLC22A4Q9H015 551 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 NTN4Q9HB63 628 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 CENPMQ9NSP4 180 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 UFSP2Q9NUQ7 469 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 MIOXQ9UGB7 285 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 NUP50Q9UKX7 468 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 PPIAL4AQ9Y536 164 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 N6AMT1Q9Y5N5 214 aa6.92□□□□□ -1.3
LSM2-213ENST00000491421 IGHV2-70DA0A0C4DH43 119 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 DHRS12A0PJE2 317 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 C5orf63A6NC05 138 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 ZNF878C9JN71 531 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 H3BN98 237 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 GMDSO60547 372 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 BPNT1O95861 308 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CST1P01037 141 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 T-ENOLP0DO92 83 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CLUP10909 449 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 SLC2A1P11166 492 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 ZNF3P17036 446 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 ANOS1P23352 680 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CFPP27918 469 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 CD80P33681 288 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 SLC15A1P46059 708 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 PITPNBP48739 271 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
LSM2-213ENST00000491421 BLVRAP53004 296 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 UBA52P62987 128 aaKnown RBP6.91□□□□□ -1.3
LSM2-213ENST00000491421 EIF2B1Q14232 305 aaKnown RBP6.91□□□□□ -1.3
LSM2-213ENST00000491421 GK3PQ14409 553 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 MPPED2Q15777 294 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 PCK2Q16822 640 aa6.91□□□□□ -1.3
LSM2-213ENST00000491421 KLF17Q5JT82 389 aaPredicted RBP6.91□□□□□ -1.3
LSM2-213ENST00000491421 TEX30Q5JUR7 227 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms