RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 OPN3Q9H1Y3 402 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-219ENST00000491128 ZNF275Q9NSD4 429 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-219ENST00000491128 ASF1BQ9NVP2 202 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 EXTL2Q9UBQ6 330 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 FAM215AQ9Y5M1 114 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 PCNX1Q96RV3 2341 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 A0A0G2JMP0 313 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 A0A0X1KG70 313 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 SS18L1O75177 396 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-219ENST00000491128 ISG15P05161 165 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 CD2P06729 351 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 TMIGD3P0DMS9 266 aaPredicted RBP12.14□□□□□ -0.47
SMPD4-219ENST00000491128 ACHEP22303 614 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 CRYGSP22914 178 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 SCRN3Q0VDG4 424 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 RAB35Q15286 201 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 PYDC2Q56P42 97 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 TFAP2EQ6VUC0 442 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 JAGN1Q8N5M9 183 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 OR4M2Q8NGB6 313 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 OR4M1Q8NGD0 313 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 OR51D1Q8NGF3 324 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 NIPAL2Q9H841 368 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 TBCCD1Q9NVR7 557 aa12.14□□□□□ -0.47
SMPD4-219ENST00000491128 C5orf49A4QMS7 147 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 PTHLHP12272 177 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 FAHP16930 419 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 IGHV1-2P23083 117 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 DCTDP32321 178 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 OR3A2P47893 321 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 ZNF45Q02386 682 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 MYPOPQ86VE0 399 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-219ENST00000491128 SPTSSAQ969W0 71 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 TINAGQ9UJW2 476 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 ZGRF1Q86YA3 2104 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 INTS1Q8N201 2190 aaKnown RBP12.13□□□□□ -0.47
SMPD4-219ENST00000491128 RPL36A-HNRNPH2H7BZ11 118 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 AIPO00170 330 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 CRYABP02511 175 aaKnown RBP12.13□□□□□ -0.47
SMPD4-219ENST00000491128 EVX1P49640 407 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 PPP3R1P63098 170 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 OR10K2Q6IF99 312 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 MZT2AQ6P582 158 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 ZNF610Q8N9Z0 462 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 OR52N4Q8NGI2 321 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 SGK3Q96BR1 496 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 HDHD2Q9H0R4 259 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 OR5V1Q9UGF6 321 aa12.13□□□□□ -0.47
SMPD4-219ENST00000491128 MED19A0JLT2 244 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-219ENST00000491128 OR6C6A6NF89 314 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 SSX4O60224 188 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 CELA3BP08861 270 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 OTX1P32242 354 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-219ENST00000491128 PSMD7P51665 324 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 EFNB2P52799 333 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 GLYATL3Q5SZD4 288 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 RHOUQ7L0Q8 258 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 ZNF584Q8IVC4 421 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 PAQR4Q8N4S7 273 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-219ENST00000491128 PKD1L2Q7Z442 2459 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 COL6A6A6NMZ7 2263 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 AHRRA9YTQ3 701 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 PDCD5O14737 125 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 UPK1BO75841 260 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 AGFG2O95081 481 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 RAF1P04049 648 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 LYSMD2Q8IV50 215 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 OR1K1Q8NGR3 316 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 PHYHIPQ92561 330 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 RFT1Q96AA3 541 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 WDFY2Q96P53 400 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 SRRQ9GZT4 340 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 PLEKHA1Q9HB21 404 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 B3GNT2Q9NY97 397 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 CKLFQ9UBR5 152 aa12.12□□□□□ -0.47
SMPD4-219ENST00000491128 ACACBO00763 2458 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 CIB4A0PJX0 185 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 TNFSF13O75888 250 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 NGFP01138 241 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 ZNF20P17024 532 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 IGFBP3P17936 291 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-219ENST00000491128 ACKR3P25106 362 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 MPGP29372 298 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 ETV6P41212 452 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 TPTEP56180 551 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 STK11Q15831 433 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 UNQ6494/PRO21346Q6UXR6 183 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 LINC00299Q6ZSB3 139 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 MDP1Q86V88 176 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 OR5D18Q8NGL1 313 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 ZCCHC14Q8WYQ9 949 aaKnown RBP12.11□□□□□ -0.47
SMPD4-219ENST00000491128 WNT2BQ93097 391 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 ZFP3Q96NJ6 502 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 CTSSP25774 331 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 PCBD1P61457 104 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 TBRG1Q3YBR2 411 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 NSUN5P2Q63ZY6 315 aa12.11□□□□□ -0.47
SMPD4-219ENST00000491128 RPUSD3Q6P087 351 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms