RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ATP6V1G3Q96LB4 118 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 PITX2Q99697 317 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 GID8Q9NWU2 228 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 IER3IP1Q9Y5U9 82 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 KPTNQ9Y664 436 aa17.03■□□□□ 0.32
CLIP2-208ENST00000491075 PLXNB1O43157 2135 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 IGLV1-36A0A0B4J1U3 117 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 OR10H3O60404 316 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 PTP4A3O75365 173 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 TXNDC12O95881 172 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 LCATP04180 440 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 CDKN2AP42771 156 aaKnown RBP17.02■□□□□ 0.32
CLIP2-208ENST00000491075 RPS6KA3P51812 740 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 TRAP1Q12931 704 aaKnown RBP17.02■□□□□ 0.32
CLIP2-208ENST00000491075 CDONQ4KMG0 1287 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 IFI44LQ53G44 452 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 SLC18B1Q6NT16 456 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 DPY19L2P2Q6ZN68 376 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 PDZD9Q8IXQ8 264 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 SLC26A10Q8NG04 563 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 NPRL2Q8WTW4 380 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 TSSK2Q96PF2 358 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 RASSF4Q9H2L5 321 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 ZNRD1Q9P1U0 126 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 RPUSD1Q9UJJ7 312 aaKnown RBP17.02■□□□□ 0.32
CLIP2-208ENST00000491075 AURKCQ9UQB9 309 aa17.02■□□□□ 0.32
CLIP2-208ENST00000491075 ZNF816-ZNF321PA0A0X1KG74 233 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 CD300LBA8K4G0 201 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 DCTN6O00399 190 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 DVL1O14640 695 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 EDF1O60869 148 aaKnown RBP17.01■□□□□ 0.31
CLIP2-208ENST00000491075 PPP1R3DO95685 299 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 ZNF682O95780 498 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 GYPAP02724 150 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 TGFBR2P37173 567 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 MDH1P40925 334 aaKnown RBP17.01■□□□□ 0.31
CLIP2-208ENST00000491075 EGR3Q06889 387 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 MAPRE2Q15555 327 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 KPRPQ5T749 579 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-208ENST00000491075 METAP1DQ6UB28 335 aaPredicted RBP17.01■□□□□ 0.31
CLIP2-208ENST00000491075 VMO1Q7Z5L0 202 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 CYP4Z1Q86W10 505 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 GALNT4Q8N4A0 578 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 SLC7A13Q8TCU3 470 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 RSRC1Q96IZ7 334 aaKnown RBP17.01■□□□□ 0.31
CLIP2-208ENST00000491075 CNTD2Q9H8S5 307 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 KAAG1Q9UBP8 84 aa17.01■□□□□ 0.31
CLIP2-208ENST00000491075 G3V4G9 280 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 FCN3O75636 299 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 TPTEP56180 551 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 SLC36A3Q495N2 470 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 REC114Q7Z4M0 266 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 NAA40Q86UY6 237 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 FAM90A1Q86YD7 464 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 LINC00346Q8IVM7 164 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 OR2AJ1Q8NGZ0 328 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 ST8SIA4Q92187 359 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 C1orf123Q9NWV4 160 aa17■□□□□ 0.31
CLIP2-208ENST00000491075 PIN1P1O15428 100 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 OPN1MWP04001 364 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 OPN1MW2P0DN77 364 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 OPN1MW3P0DN78 364 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 GGT2P36268 569 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 FXYD6P3P58550 94 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 GUCA2AQ02747 115 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 KLF10Q13118 480 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 FKBP9P1Q75LS8 142 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 GCSAMQ8N6F7 178 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 SPERTQ8NA61 448 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 DMRTB1Q96MA1 342 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 TMEM120AQ9BXJ8 343 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 PNRC2Q9NPJ4 139 aaKnown RBP16.99■□□□□ 0.31
CLIP2-208ENST00000491075 MRPL15Q9P015 296 aaKnown RBP16.99■□□□□ 0.31
CLIP2-208ENST00000491075 B9D1Q9UPM9 204 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 AP3M1Q9Y2T2 418 aa16.99■□□□□ 0.31
CLIP2-208ENST00000491075 hCG_1807616A0A1W2PRN6 198 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 A0A1W2PRQ8 180 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 A6NLC8 198 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 M0R135 149 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 OMPP47874 163 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 MZT1Q08AG7 82 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 DGCR6Q14129 220 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 SAMD5Q5TGI4 173 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 TEX36Q5VZQ5 186 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 Q6ZPA2 131 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 CBLL1Q75N03 491 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 TSEN54Q7Z6J9 526 aaKnown RBP16.98■□□□□ 0.31
CLIP2-208ENST00000491075 CMTM4Q8IZR5 234 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 OR6V1Q8N148 313 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 ZNF799Q96GE5 643 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 HSH2DQ96JZ2 352 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 SEMA6AQ9H2E6 1030 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 SRA1Q9HD15 236 aaKnown RBP16.98■□□□□ 0.31
CLIP2-208ENST00000491075 KRCC1Q9NPI7 259 aaPredicted RBP16.98■□□□□ 0.31
CLIP2-208ENST00000491075 ONECUT1Q9UBC0 465 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 CYB5R1Q9UHQ9 305 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 ENPP4Q9Y6X5 453 aa16.98■□□□□ 0.31
CLIP2-208ENST00000491075 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-208ENST00000491075 GGT3PA6NGU5 568 aa16.97■□□□□ 0.31
CLIP2-208ENST00000491075 CXCR6O00574 342 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms