RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 TRAV38-1A0A0B4J264 116 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 CXCR6O00574 342 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 FCN3O75636 299 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 TXNDC12O95881 172 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 OMPP47874 163 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 POU4F2Q12837 409 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 SLC18B1Q6NT16 456 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 DPY19L2P2Q6ZN68 376 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 BTN2A1Q7KYR7 527 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 MRPL21Q7Z2W9 205 aaKnown RBP14.01□□□□□ -0.17
TOP3B-217ENST00000489581 CYP4Z1Q86W10 505 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 LDLRAD3Q86YD5 345 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 OR6V1Q8N148 313 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 ERMAPQ96PL5 475 aaPredicted RBP14.01□□□□□ -0.17
TOP3B-217ENST00000489581 ATF6BQ99941 703 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 DPAGT1Q9H3H5 408 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 ANKRD19PQ9H560 264 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 SAR1AQ9NR31 198 aa14.01□□□□□ -0.17
TOP3B-217ENST00000489581 NOTCH3Q9UM47 2321 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 OOEPA6NGQ2 149 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 CD300LBA8K4G0 201 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 GSTA4O15217 222 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 OR10H3O60404 316 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 PPP1R3DO95685 299 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 SERPINA1P01009 418 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 LIPEQ05469 1076 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 TRAP1Q12931 704 aaKnown RBP14□□□□□ -0.17
TOP3B-217ENST00000489581 FGD3Q5JSP0 725 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 GDPGP1Q6ZNW5 385 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 ZNF826PQ6ZT77 177 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 SLC15A3Q8IY34 581 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 SLC26A10Q8NG04 563 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 OR2AJ1Q8NGZ0 328 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 RCN3Q96D15 328 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 NMNAT3Q96T66 252 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 ADAT1Q9BUB4 502 aaKnown RBP14□□□□□ -0.17
TOP3B-217ENST00000489581 SLC22A4Q9H015 551 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 C1orf123Q9NWV4 160 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 AURKCQ9UQB9 309 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 FAM96BQ9Y3D0 163 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 ENPP4Q9Y6X5 453 aa14□□□□□ -0.17
TOP3B-217ENST00000489581 UNC119BA6NIH7 251 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 DVL1O14640 695 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 NDUFA2O43678 99 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 H1F0P07305 194 aaKnown RBP13.99□□□□□ -0.17
TOP3B-217ENST00000489581 GRPP07492 148 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 GGT2P36268 569 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 TPTEP56180 551 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 ZNF92Q03936 586 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 ECH1Q13011 328 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 VMO1Q7Z5L0 202 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 FAM90A1Q86YD7 464 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 FGFRL1Q8N441 504 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 ST8SIA4Q92187 359 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 SEMA6AQ9H2E6 1030 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 C16orf95Q9H693 158 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 PNRC2Q9NPJ4 139 aaKnown RBP13.99□□□□□ -0.17
TOP3B-217ENST00000489581 TRIM36Q9NQ86 728 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 RPRD1BQ9NQG5 326 aaKnown RBP13.99□□□□□ -0.17
TOP3B-217ENST00000489581 MRGBPQ9NV56 204 aa13.99□□□□□ -0.17
TOP3B-217ENST00000489581 NOP16Q9Y3C1 178 aaKnown RBP13.99□□□□□ -0.17
TOP3B-217ENST00000489581 IGHV3OR15-7A0A075B7D8 119 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 TRBV4-1A0A0J9YWV2 114 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 hCG_1807616A0A1W2PRN6 198 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 A0A1W2PRQ8 180 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 GGT3PA6NGU5 568 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 A6NLC8 198 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 HMGB1P1B2RPK0 211 aaPredicted RBP13.98□□□□□ -0.17
TOP3B-217ENST00000489581 GMDSO60547 372 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 PTBP3O95758 552 aaKnown RBP13.98□□□□□ -0.17
TOP3B-217ENST00000489581 RENP00797 406 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 HLA-DQA2P01906 255 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 ANOS1P23352 680 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 DGCR6Q14129 220 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 SEC23BQ15437 767 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 C2orf68Q2NKX9 166 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 SNAI3Q3KNW1 292 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 SLC36A3Q495N2 470 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 DHRS7BQ6IAN0 325 aaPredicted RBP13.98□□□□□ -0.17
TOP3B-217ENST00000489581 SMARCD3Q6STE5 483 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 GCSAMQ8N6F7 178 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 PLPP7Q8NBV4 271 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 OR4K13Q8NH42 304 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 OR2AE1Q8NHA4 323 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 LRTOMTQ8WZ04 291 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 CNTD2Q9H8S5 307 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 CYB5R1Q9UHQ9 305 aa13.98□□□□□ -0.17
TOP3B-217ENST00000489581 FAM32AQ9Y421 112 aaKnown RBP13.98□□□□□ -0.17
TOP3B-217ENST00000489581 ZNF816-ZNF321PA0A0X1KG74 233 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 C5orf63A6NC05 138 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 M0R135 149 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 ECDO95905 644 aaPredicted RBP13.97□□□□□ -0.17
TOP3B-217ENST00000489581 CSF1P09603 554 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 TROVE2P10155 538 aaKnown RBP eCLIP13.97□□□□□ -0.17
TOP3B-217ENST00000489581 HIST1H1CP16403 213 aaKnown RBP13.97□□□□□ -0.17
TOP3B-217ENST00000489581 ELF3P78545 371 aaPredicted RBP13.97□□□□□ -0.17
TOP3B-217ENST00000489581 PRB3Q04118 309 aaPredicted RBP13.97□□□□□ -0.17
TOP3B-217ENST00000489581 EGR3Q06889 387 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 CDONQ4KMG0 1287 aa13.97□□□□□ -0.17
TOP3B-217ENST00000489581 HIST2H2BDQ6DRA6 164 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms