RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TAS2R43P59537 309 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 PSMA6P60900 246 aaKnown RBP12.29□□□□□ -0.44
CLDN11-209ENST00000489485 SLC3A1Q07837 685 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 CCDC58Q4VC31 144 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 OR2G2Q8NGZ5 317 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 UFD1Q92890 307 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 DCLRE1CQ96SD1 692 aaKnown RBP12.29□□□□□ -0.44
CLDN11-209ENST00000489485 PDCD1LG2Q9BQ51 273 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 FAM206AQ9NX38 181 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 ST6GALNAC2Q9UJ37 374 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 SLC22A13Q9Y226 551 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 CEPT1Q9Y6K0 416 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 CPEP16870 476 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 NR4A1P22736 598 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 TTKP33981 857 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 RAD52P43351 418 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 TGM4P49221 684 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 RGS6P49758 472 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 BDH1Q02338 343 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 MRPL28Q13084 256 aaKnown RBP12.29□□□□□ -0.44
CLDN11-209ENST00000489485 SNTB2Q13425 540 aaKnown RBP12.29□□□□□ -0.44
CLDN11-209ENST00000489485 ALKBH1Q13686 389 aaKnown RBP12.29□□□□□ -0.44
CLDN11-209ENST00000489485 CDK5R1Q15078 307 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 KRTAP27-1Q3LI81 207 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 WDR38Q5JTN6 314 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 VHLLQ6RSH7 139 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 UNQ6126/PRO20091Q6UXV3 157 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 FAM57BQ71RH2 274 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 CATSPERDQ86XM0 798 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 PHC2Q8IXK0 858 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 HAVCR2Q8TDQ0 301 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 ISYNA1Q9NPH2 558 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 G6PC2Q9NQR9 355 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 OR52A1Q9UKL2 312 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 ATP23Q9Y6H3 246 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 LRBAP50851 2863 aa12.29□□□□□ -0.44
CLDN11-209ENST00000489485 SHISA9B4DS77 424 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 H3BSH0 61 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 ZNF701M0R085 212 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-209ENST00000489485 CCRL2O00421 344 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 OGG1O15527 345 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 PLPP2O43688 288 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 SMPD2O60906 423 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 ZFPL1O95159 310 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 LOXP28300 417 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-209ENST00000489485 PCSK6P29122 969 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 TPBGQ13641 420 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 SSX1Q16384 188 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 BCL2L15Q5TBC7 163 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 DMKNQ6E0U4 476 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-209ENST00000489485 RFPL4BQ6ZWI9 263 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 PRSS45Q7RTY3 260 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 GPR141Q7Z602 305 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 RDH10Q8IZV5 341 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 OR1J1Q8NGS3 322 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 OR13F1Q8NGS4 319 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 GHSRQ92847 366 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 TMEM203Q969S6 136 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 APOBEC3DQ96AK3 386 aaPredicted RBP12.28□□□□□ -0.44
CLDN11-209ENST00000489485 SMIM19Q96E16 107 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 BCL2L14Q9BZR8 327 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 PBOV1Q9GZY1 135 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 TBCCD1Q9NVR7 557 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 ZNF319Q9P2F9 582 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 CELSR2Q9HCU4 2923 aa12.28□□□□□ -0.44
CLDN11-209ENST00000489485 C5orf63A6NC05 138 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 TBX1O43435 398 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 KIR3DL2P43630 455 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 GFOD2Q3B7J2 385 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 SPATA46Q5T0L3 261 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 FDX2Q6P4F2 183 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 ZNF704Q6ZNC4 412 aaPredicted RBP12.27□□□□□ -0.44
CLDN11-209ENST00000489485 OR5AK2Q8NH90 309 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 NEUROG1Q92886 237 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 PGAM5Q96HS1 289 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 TMED9Q9BVK6 235 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 C1QTNF5Q9BXJ0 243 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 CA10Q9NS85 328 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 STARD10Q9Y365 291 aa12.27□□□□□ -0.44
CLDN11-209ENST00000489485 OR4C45A6NMZ5 311 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 GPRIN2O60269 458 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 CTAG2O75638 210 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 CD36P16671 472 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 CCR9P51686 369 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 ERVS71-1P61550 626 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 PPP1CBP62140 327 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 ZNF544Q6NX49 715 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 TMEM200AQ86VY9 491 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 ZNF676Q8N7Q3 588 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 OR8B12Q8NGG6 310 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 PGLYRP3Q96LB9 341 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 TMEM204Q9BSN7 226 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 CLEC4MQ9H2X3 399 aaPredicted RBP12.27□□□□□ -0.45
CLDN11-209ENST00000489485 SP140LQ9H930 580 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 NDUFB11Q9NX14 153 aa12.27□□□□□ -0.45
CLDN11-209ENST00000489485 CISD1Q9NZ45 108 aaKnown RBP12.27□□□□□ -0.45
CLDN11-209ENST00000489485 H3BSA7 217 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms