RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 MED21Q13503 144 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 SNAI3Q3KNW1 292 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 FBXW12Q6X9E4 464 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 BPIFB6Q8NFQ5 453 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 GSX2Q9BZM3 304 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 RASSF4Q9H2L5 321 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 Q9H521 79 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 BARX1Q9HBU1 254 aaPredicted RBP13.48□□□□□ -0.25
C9orf3-219ENST00000488186 CHCHD3Q9NX63 227 aaKnown RBP13.48□□□□□ -0.25
C9orf3-219ENST00000488186 MYEF2Q9P2K5 600 aaKnown RBP13.48□□□□□ -0.25
C9orf3-219ENST00000488186 PURGQ9UJV8 347 aaKnown RBP13.48□□□□□ -0.25
C9orf3-219ENST00000488186 GNG8Q9UK08 70 aa13.48□□□□□ -0.25
C9orf3-219ENST00000488186 GGT3PA6NGU5 568 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 ACOD1A6NK06 481 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 H7C417 338 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 MAGEB4O15481 346 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 TPD52L2O43399 206 aaKnown RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 FAM20BO75063 409 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 SULT1C4O75897 302 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 NAT2P11245 290 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 CFL1P23528 166 aaKnown RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 DCTDP32321 178 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF81P51508 661 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 PSMA6P60900 246 aaKnown RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 CSNK2BP67870 215 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 GK2Q14410 553 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 ZMAT1Q5H9K5 638 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 OR2T2Q6IF00 324 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 SSX6Q7RTT6 188 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 KCTD20Q7Z5Y7 419 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 LHFPL3Q86UP9 236 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 COMMD2Q86X83 199 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 OR5AS1Q8N127 324 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 RFLNBQ8N5W9 214 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 OR52I1Q8NGK6 324 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 SPRYD4Q8WW59 207 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 OPA3Q9H6K4 179 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 INPP5EQ9NRR6 644 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF701Q9NV72 531 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 MRPS18AQ9NVS2 196 aaKnown RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 SCN3BQ9NY72 215 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 CGGBP1Q9UFW8 167 aaPredicted RBP13.47□□□□□ -0.25
C9orf3-219ENST00000488186 RAB26Q9ULW5 256 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 USF3Q68DE3 2245 aa13.47□□□□□ -0.25
C9orf3-219ENST00000488186 EFCAB10A6NFE3 127 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 LOC110117498-PIK3R3F6TDL0 507 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 J3QLW9 94 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF19P17023 458 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 MYL12AP19105 171 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 KITLGP21583 273 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 DCKP27707 260 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 ACTA2P62736 377 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 ACTG2P63267 376 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 ZNF85Q03923 595 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 TP53I3Q53FA7 332 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 GLYATL3Q5SZD4 288 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 PRSS57Q6UWY2 283 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 ZCCHC24Q8N2G6 241 aaKnown RBP13.46□□□□□ -0.25
C9orf3-219ENST00000488186 STX19Q8N4C7 294 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 OR2AE1Q8NHA4 323 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 REEP6Q96HR9 211 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 CNBD2Q96M20 576 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 TPK1Q9H3S4 243 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 MRM2Q9UI43 246 aaKnown RBP13.46□□□□□ -0.25
C9orf3-219ENST00000488186 MYRFQ9Y2G1 1151 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 SNX5Q9Y5X3 404 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 R4GMQ9 66 aa13.46□□□□□ -0.25
C9orf3-219ENST00000488186 PRR32B1ATL7 298 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 J3QRE1 110 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 SPRY3O43610 288 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 F12P00748 615 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-219ENST00000488186 MYF6P23409 242 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 TNFSF4P23510 183 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 EFNA4P52798 201 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ZNF92Q03936 586 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 GALEQ14376 348 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 PCGF3Q3KNV8 242 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 BCL2L15Q5TBC7 163 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 LIPNQ5VXI9 398 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ZNF540Q8NDQ6 660 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 BHLHE23Q8NDY6 225 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 NEU4Q8WWR8 484 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-219ENST00000488186 GGHQ92820 318 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 SGK3Q96BR1 496 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 TMEM80Q96HE8 168 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 DIRC2Q96SL1 478 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ZNF184Q99676 751 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ALG8Q9BVK2 526 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ANKRD60Q9BZ19 345 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 PBOV1Q9GZY1 135 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 RGCCQ9H4X1 137 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 FGF20Q9NP95 211 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-219ENST00000488186 DECR2Q9NUI1 292 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ZNF391Q9UJN7 358 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 OR52A1Q9UKL2 312 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ZDHHC8Q9ULC8 765 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 ARFGEF3Q5TH69 2177 aa13.45□□□□□ -0.26
C9orf3-219ENST00000488186 CELSR1Q9NYQ6 3014 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms