RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 GATSQ8NAP1 163 aa2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR10AD1Q8NGE0 317 aa2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR52K1Q8NGK4 314 aa2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR1J4Q8NGS1 313 aa2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 RERGQ96A58 199 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR52D1Q9H346 318 aa2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 MRPS30Q9NP92 439 aaKnown RBP2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 PTTG3PQ9NZH4 202 aa2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 MYEF2Q9P2K5 600 aaKnown RBP2.19□□□□□ -2.06
HMGB1P36-201ENST00000487709 TTC41PQ6P2S7 1318 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 IGHV3OR16-9A0A0B4J2B5 98 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 TMEM120BA0PK00 339 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 NCF1BA6NI72 391 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 NCBP2LA6PVI3 153 aaKnown RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 GABRR3A8MPY1 467 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 NCF1CA8MVU1 366 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 SLC9A3R1O14745 358 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 TAAR5O14804 337 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 RAD1O60671 282 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 GATBO75879 557 aaKnown RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 IGHV3-11P01762 117 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 CD74P04233 296 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 IFNW1P05000 195 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 FGF4P08620 206 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR8U9P0C7N5 309 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF806P0C7X5 589 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 UBCP0CG48 685 aaKnown RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 CCT6AP40227 531 aaKnown RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 RFC3P40938 356 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 SLC11A1P49279 550 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 AP1S2P56377 157 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 TAS2R31P59538 309 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 RPL23P62829 140 aaKnown RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 RAD51Q06609 339 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF33AQ06730 810 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF816Q0VGE8 651 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 SAXO2Q658L1 398 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 MDP1Q86V88 176 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 UNC93AQ86WB7 457 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 ERO1BQ86YB8 467 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 KATNAL2Q8IYT4 538 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 OFCC1Q8IZS5 231 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF709Q8N972 641 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 INO80EQ8NBZ0 244 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 SLC25A46Q96AG3 418 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 TEAD3Q99594 435 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 FOXC2Q99958 501 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 BPIFA3Q9BQP9 254 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 RHOXF2Q9BQY4 288 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 TEKT3Q9BXF9 490 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF717Q9BY31 904 aaPredicted RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 BEX1Q9HBH7 125 aa2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 CHTOPQ9Y3Y2 248 aaKnown RBP2.18□□□□□ -2.06
HMGB1P36-201ENST00000487709 UBN2Q6ZU65 1347 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 GPATCH8Q9UKJ3 1502 aaKnown RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 GOLGA6L7A0A1B0GV03 622 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 SUPT3HB4E1H0 165 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 GOLGA8TH3BQL2 631 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 GABRPO00591 440 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 PLPP1O14494 284 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 SOCS1O15524 211 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 FCN3O75636 299 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 CCNKO75909 580 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 KRT16P08779 473 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 TPM1P09493 284 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR8G3PP0DMU2 310 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 GFAPP14136 432 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 NAB1Q13506 487 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 RBMY1FQ15415 496 aaKnown RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 LY6EQ16553 131 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 HADHQ16836 314 aaKnown RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 TRMT5Q32P41 509 aaKnown RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 THOC7Q6I9Y2 204 aaKnown RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 IGFL1Q6UW32 110 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 PQLC3Q8N755 202 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 LRRC52Q8N7C0 313 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 NECAP1Q8NC96 275 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 C19orf18Q8NEA5 215 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 TTLQ8NG68 377 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 RCN3Q96D15 328 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 OPALINQ96PE5 141 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 RNF5Q99942 180 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF2Q9BSG1 426 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 C1orf50Q9BV19 199 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 OSBPL11Q9BXB4 747 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 SLIRPQ9GZT3 109 aaKnown RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 SLC38A10Q9HBR0 1119 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 RPRD1BQ9NQG5 326 aaKnown RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 PXMP2Q9NR77 195 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 FBXO6Q9NRD1 293 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 RGS18Q9NS28 235 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 PDP1Q9P0J1 537 aaPredicted RBP2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 TBC1D24Q9ULP9 559 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 DOCK8Q8NF50 2099 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 MROH5Q6ZUA9 1318 aa2.17□□□□□ -2.06
HMGB1P36-201ENST00000487709 IGHV3-49A0A0A0MS15 119 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 IGHV7-4-1A0A0J9YVY3 117 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 A0A0J9YXV3 536 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 A0A1B0GUH1 482 aa2.16□□□□□ -2.06
HMGB1P36-201ENST00000487709 SERTM2A0A1B0GWG4 89 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms