RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 XRCC2O43543 280 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 ANXA2P07355 339 aaKnown RBP15.43■□□□□ 0.06
COL1A1-207ENST00000486572 TNFRSF1AP19438 455 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 ALOX5APP20292 161 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 CDC42P60953 191 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 SPRNQ5BIV9 151 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.43■□□□□ 0.06
COL1A1-207ENST00000486572 OR10AD1Q8NGE0 317 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 OR8J1Q8NGP2 316 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 CCL17Q92583 94 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 HPS1Q92902 700 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 IL19Q9UHD0 177 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 TMEM14AQ9Y6G1 99 aa15.43■□□□□ 0.06
COL1A1-207ENST00000486572 C2CD3Q4AC94 2353 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 ABCA1O95477 2261 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 TBX1O43435 398 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 ZNF16P17020 682 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-207ENST00000486572 HCCSP53701 268 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 ZNF121P58317 390 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-207ENST00000486572 C6orf52Q5T4I8 152 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 CYB5R2Q6BCY4 276 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 KCTD18Q6PI47 426 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-207ENST00000486572 LRRN1Q6UXK5 716 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 PRSS45Q7RTY3 260 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 OR52H1Q8NGJ2 320 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 SPRYD4Q8WW59 207 aaPredicted RBP15.42■□□□□ 0.06
COL1A1-207ENST00000486572 OR2V2Q96R30 315 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 REPIN1Q9BWE0 567 aaKnown RBP15.42■□□□□ 0.06
COL1A1-207ENST00000486572 NIPAL2Q9H841 368 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 TMEM100Q9NV29 134 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 TREM2Q9NZC2 230 aa15.42■□□□□ 0.06
COL1A1-207ENST00000486572 A0A1B0GWJ7 208 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 CD300LBA8K4G0 201 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 INAFM1C9JVW0 142 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 MLNRO43193 412 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 BAG2O95816 211 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 PSMA6P60900 246 aaKnown RBP15.41■□□□□ 0.06
COL1A1-207ENST00000486572 SLC3A1Q07837 685 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 ZIK1Q3SY52 487 aaPredicted RBP15.41■□□□□ 0.06
COL1A1-207ENST00000486572 FAM57BQ71RH2 274 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 KRT77Q7Z794 578 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 FAM81AQ8TBF8 368 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 ITLN1Q8WWA0 313 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 ASB17Q8WXJ9 295 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 SPSB4Q96A44 273 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 EME1Q96AY2 570 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 TIMD4Q96H15 378 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 HRASLS5Q96KN8 279 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 NARFLQ9H6Q4 476 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 ADGRL4Q9HBW9 690 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 YAE1D1Q9NRH1 226 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 IMPAD1Q9NX62 359 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 HAO2Q9NYQ3 351 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 WARS2Q9UGM6 360 aaKnown RBP15.41■□□□□ 0.06
COL1A1-207ENST00000486572 LRP12Q9Y561 859 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 TANC2Q9HCD6 1990 aa15.41■□□□□ 0.06
COL1A1-207ENST00000486572 FN1P02751 2386 aaKnown RBP15.41■□□□□ 0.06
COL1A1-207ENST00000486572 GGT3PA6NGU5 568 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 H0YL77 283 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 IL2RGP31785 369 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 SRP9P49458 86 aaKnown RBP15.4■□□□□ 0.06
COL1A1-207ENST00000486572 MVKQ03426 396 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
COL1A1-207ENST00000486572 ZSCAN26Q16670 478 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 TIGD6Q17RP2 521 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 AVPI1Q5T686 147 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 DEGS2Q6QHC5 323 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 ZBTB49Q6ZSB9 765 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 SLC35F2Q8IXU6 374 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 CLDND2Q8NHS1 167 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 RAB1CQ92928 201 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 MSI2Q96DH6 328 aaKnown RBP15.4■□□□□ 0.06
COL1A1-207ENST00000486572 PGAM5Q96HS1 289 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 MNTQ99583 582 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 MROQ9BYG7 248 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 SLC22A4Q9H015 551 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 OR10A2Q9H208 303 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 BRD7Q9NPI1 651 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 COPS3Q9UNS2 423 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 PPP1R3CQ9UQK1 317 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 NOP16Q9Y3C1 178 aaKnown RBP15.4■□□□□ 0.06
COL1A1-207ENST00000486572 WIPI2Q9Y4P8 454 aa15.4■□□□□ 0.06
COL1A1-207ENST00000486572 NIPBLQ6KC79 2804 aaeCLIP15.39■□□□□ 0.06
COL1A1-207ENST00000486572 YLPM1P49750 1951 aaKnown RBP15.39■□□□□ 0.05
COL1A1-207ENST00000486572 A8MV72 311 aaPredicted RBP15.39■□□□□ 0.05
COL1A1-207ENST00000486572 F5H5P2 479 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 PHYHO14832 338 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 WNT9BO14905 357 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 HLA-DPB1P04440 258 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 CFL1P23528 166 aaKnown RBP15.39■□□□□ 0.05
COL1A1-207ENST00000486572 HTR1FP30939 366 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 ROM1Q03395 351 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 POU4F2Q12837 409 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 PEG10Q86TG7 708 aaKnown RBP15.39■□□□□ 0.05
COL1A1-207ENST00000486572 OR56B2PQ8NGI1 322 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 OR51G2Q8NGK0 314 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 TRUB1Q8WWH5 349 aaKnown RBP15.39■□□□□ 0.05
COL1A1-207ENST00000486572 RFKQ969G6 155 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 SGK3Q96BR1 496 aa15.39■□□□□ 0.05
COL1A1-207ENST00000486572 REEP6Q96HR9 211 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms