RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 C1QL2Q7Z5L3 287 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 MOGAT3Q86VF5 341 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 SPATA24Q86W54 205 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 IQCF1Q8N6M8 205 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 ERGIC1Q969X5 290 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 SLC22A4Q9H015 551 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 YY1AP1Q9H869 796 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 TMEM165Q9HC07 324 aa15.47■□□□□ 0.07
PRPF40A-209ENST00000486100 IGHV3-64DA0A0J9YX35 117 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 FAM183AA6NL82 134 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 LRRC30A6NM36 301 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF878C9JN71 531 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 F5H0A9 414 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 DNAJC8O75937 253 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 FSTL3O95633 263 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 CYB5R3P00387 301 aaPredicted RBP15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 POU1F1P28069 291 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 PMELP40967 661 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF92Q03936 586 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 C1orf87Q8N0U7 546 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 NANPQ8TBE9 248 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 MED20Q9H944 212 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 ZNF556Q9HAH1 456 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 OPN4Q9UHM6 478 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 POMPQ9Y244 141 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 NOP16Q9Y3C1 178 aaKnown RBP15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 STAB1Q9NY15 2570 aa15.46■□□□□ 0.07
PRPF40A-209ENST00000486100 TCRBV3S1A0A5B6 114 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 C5orf63A6NC05 138 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 GGT3PA6NGU5 568 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 CEACAM18A8MTB9 384 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 E2F6O75461 281 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 GLCEO94923 617 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 WNT2P09544 360 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 OSMP13725 252 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 ANXA8P13928 327 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 EPHA1P21709 976 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 GSTT1P30711 240 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 CD200P41217 278 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 SLC15A1P46059 708 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 GRB2P62993 217 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 CBX1P83916 185 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 EIF2B1Q14232 305 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 GINS1Q14691 196 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 GLYATL3Q5SZD4 288 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 DPY19L4Q7Z388 723 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 PAPD5Q8NDF8 572 aaKnown RBP15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 OR2AE1Q8NHA4 323 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 ZNF418Q8TF45 676 aaPredicted RBP15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 OTULINQ96BN8 352 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 INTS14Q96SY0 518 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 MARCH7Q9H992 704 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 MMP26Q9NRE1 261 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 DNAJB9Q9UBS3 223 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 DYSFO75923 2080 aa15.45■□□□□ 0.06
PRPF40A-209ENST00000486100 A8MXK9 166 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 TRAPPC2LH3BP13 241 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 GMDSO60547 372 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 FKBP6O75344 327 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 ZNF205O95201 554 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 VENTXO95231 258 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 HMGN1P05114 100 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 SLC2A1P11166 492 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 ADRA2CP18825 462 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 PAICSP22234 425 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 PRKACGP22612 351 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 CA6P23280 308 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 ANOS1P23352 680 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 RAD23AP54725 363 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 SEC61A1P61619 476 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 CDK5Q00535 292 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 OR8G1Q15617 311 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 ESCO2Q56NI9 601 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 USP43Q70EL4 1123 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 SPATC1Q76KD6 591 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 SHFQ7M4L6 423 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 ERI1Q8IV48 349 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 HS3ST5Q8IZT8 346 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 OR6N2Q8NGY6 317 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 Q8TCH9 128 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 RNF133Q8WVZ7 376 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 OR51V1Q9H2C8 321 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 TOR3AQ9H497 397 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 OPA3Q9H6K4 179 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 MRPL15Q9P015 296 aaKnown RBP15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 MIOXQ9UGB7 285 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 PPIAL4AQ9Y536 164 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 N6AMT1Q9Y5N5 214 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 TANC2Q9HCD6 1990 aa15.44■□□□□ 0.06
PRPF40A-209ENST00000486100 PRR23D1E9PI22 279 aaPredicted RBP15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 GSC2O15499 205 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 XRCC2O43543 280 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 PRR23D2P0DMB1 279 aaPredicted RBP15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 IRF2P14316 349 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 RHOUQ7L0Q8 258 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 TIGD4Q8IY51 512 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 DEFB108BQ8NET1 73 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 OR11L1Q8NGX0 322 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 SPSB4Q96A44 273 aa15.43■□□□□ 0.06
PRPF40A-209ENST00000486100 TMEM246Q9BRR3 403 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms