RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 MMP15P51511 669 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 PSMA6P60900 246 aaKnown RBP10.14□□□□□ -0.79
APTX-227ENST00000485479 POU4F2Q12837 409 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 CARTPTQ16568 116 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 TSTQ16762 297 aaKnown RBP10.14□□□□□ -0.79
APTX-227ENST00000485479 KCTD18Q6PI47 426 aaPredicted RBP10.14□□□□□ -0.79
APTX-227ENST00000485479 PGAP1Q75T13 922 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 OR2T27Q8NH04 317 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 SNX33Q8WV41 574 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 LYZL4Q96KX0 146 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 Q96MT0 163 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 VCX3BQ9H321 246 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 FAM206AQ9NX38 181 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 PURGQ9UJV8 347 aaKnown RBP10.14□□□□□ -0.79
APTX-227ENST00000485479 SLC22A13Q9Y226 551 aa10.14□□□□□ -0.79
APTX-227ENST00000485479 VSTM5A8MXK1 200 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 IGHV3-13P01766 116 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 RGS6P49758 472 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 RIDAP52758 137 aaKnown RBP10.13□□□□□ -0.79
APTX-227ENST00000485479 ROM1Q03395 351 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 TIGD6Q17RP2 521 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 LIPNQ5VXI9 398 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 UNQ6126/PRO20091Q6UXV3 157 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 AHSA2Q719I0 299 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 MRPL21Q7Z2W9 205 aaKnown RBP10.13□□□□□ -0.79
APTX-227ENST00000485479 THAP5Q7Z6K1 395 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 COMMD2Q86X83 199 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 ASB17Q8WXJ9 295 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 SGK3Q96BR1 496 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 REEP6Q96HR9 211 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 C4orf36Q96KX1 117 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 DCLRE1CQ96SD1 692 aaKnown RBP10.13□□□□□ -0.79
APTX-227ENST00000485479 ZNF701Q9NV72 531 aaPredicted RBP10.13□□□□□ -0.79
APTX-227ENST00000485479 CLEC2DQ9UHP7 191 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 RPL36Q9Y3U8 105 aaKnown RBP10.13□□□□□ -0.79
APTX-227ENST00000485479 PMF1-BGLAPU3KQ54 211 aa10.13□□□□□ -0.79
APTX-227ENST00000485479 A6NIN4 97 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 SNTNA6NMZ2 147 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 J3QLW9 94 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 CDC14BO60729 498 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 FAM20BO75063 409 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 HPXP02790 462 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 KRT8P05787 483 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ZNF19P17023 458 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ETV1P50549 477 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 SELENOVP59797 346 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 HOXA4Q00056 320 aaPredicted RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 MALLQ13021 153 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 IL18R1Q13478 541 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ZNF684Q5T5D7 378 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 OR2G6Q5TZ20 316 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 MAPK1IP1LQ8NDC0 245 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 OR56B2PQ8NGI1 322 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 OR5L1Q8NGL2 311 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 GGHQ92820 318 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ZNF649Q9BS31 505 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ALG8Q9BVK2 526 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 BEX4Q9NWD9 120 aaPredicted RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 EXOGQ9Y2C4 368 aaKnown RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 CACNG2Q9Y698 323 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ITPR3Q14573 2671 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 PLSCR5A0PG75 271 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 TRIM64A6NGJ6 449 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 TRIM64BA6NI03 449 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 H7C417 338 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 TPD52L2O43399 206 aaKnown RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 SRSF10O75494 262 aaKnown RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 IGHV1-46P01743 117 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 C21orf33P30042 268 aaPredicted RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 ZNF81P51508 661 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 EGR3Q06889 387 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 RAB40BQ12829 278 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 TNK1Q13470 666 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 DOC2BQ14184 412 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 FBXW12Q6X9E4 464 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 RDH10Q8IZV5 341 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ACBD7Q8N6N7 88 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 OR2Z1Q8NG97 314 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 OR51E1Q8TCB6 317 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 FBLIM1Q8WUP2 373 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 RORBQ92753 470 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 RNF166Q96A37 237 aaPredicted RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 HAVCR1Q96D42 359 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 MBD6Q96DN6 1003 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 TRMT61AQ96FX7 289 aaKnown RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 FAM71F1Q96KD3 344 aaPredicted RBP10.12□□□□□ -0.79
APTX-227ENST00000485479 Q96MF0 132 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 SIGLEC11Q96RL6 698 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ANKRD60Q9BZ19 345 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 GSX2Q9BZM3 304 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 PBOV1Q9GZY1 135 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 ERVK13-1Q9NX77 482 aa10.12□□□□□ -0.79
APTX-227ENST00000485479 GGT3PA6NGU5 568 aa10.11□□□□□ -0.79
APTX-227ENST00000485479 C17orf100A8MU93 164 aa10.11□□□□□ -0.79
APTX-227ENST00000485479 PTGES3LE9PB15 166 aa10.11□□□□□ -0.79
APTX-227ENST00000485479 E9PI62 339 aa10.11□□□□□ -0.79
APTX-227ENST00000485479 LOC110117498-PIK3R3F6TDL0 507 aa10.11□□□□□ -0.79
APTX-227ENST00000485479 FADS2O95864 444 aaKnown RBP10.11□□□□□ -0.79
APTX-227ENST00000485479 IGHA1P01876 353 aa10.11□□□□□ -0.79
APTX-227ENST00000485479 TTRP02766 147 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms