RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 RAB34Q9BZG1 259 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 IL25Q9H293 177 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 MIXL1Q9H2W2 232 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 DSN1Q9H410 356 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 FKRPQ9H9S5 495 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ACOT13Q9NPJ3 140 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 OCIAD1Q9NX40 245 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 TAS2R13Q9NYV9 303 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 TAS2R1Q9NYW7 299 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 ZNF224Q9NZL3 707 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 TMEM181Q9P2C4 612 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 SEC14L4Q9UDX3 406 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 IL36AQ9UHA7 158 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 AMDHD2Q9Y303 409 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 UFC1Q9Y3C8 167 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 WIPI2Q9Y4P8 454 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 DOCK7Q96N67 2140 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 VIRMAQ69YN4 1812 aaKnown RBP3.44□□□□□ -1.86
VPS41-212ENST00000482217 POGZQ7Z3K3 1410 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 NEDD4P46934 1319 aa3.44□□□□□ -1.86
VPS41-212ENST00000482217 BRCA1P38398 1863 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 SYNMO15061 1565 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 IGLV3-22A0A075B6J6 115 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 IGHV2-70DA0A0C4DH43 119 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 OR6C6A6NF89 314 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 OR5B21A6NL26 309 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CLDN24A6NM45 220 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 KRTAP29-1A8MX34 341 aaPredicted RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 EVPLLA8MZ36 301 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 SNURFLB1AK76 121 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TSTD3H0UI37 97 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 K7EMT4 169 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 KPNA4O00629 521 aaPredicted RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 ERI3O43414 337 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 CXCL13O43927 109 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CDC40O60508 579 aaKnown RBP eCLIP3.43□□□□□ -1.86
VPS41-212ENST00000482217 ZG16O60844 167 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 SERPINB7O75635 380 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 S1PR2O95136 353 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 LYPD3O95274 346 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 KLF8O95600 359 aaPredicted RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 PMS2P2O95744 297 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 LSM8O95777 96 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 GPR75O95800 540 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 GCGP01275 180 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 LINC00271P0C7V0 271 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 T-ENOLP0DO92 83 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 ESDP10768 282 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 BCKDHAP12694 445 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 ATP6V1B2P21281 511 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 ANOS1P23352 680 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 ATP5A1P25705 553 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 S100PP25815 95 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 NTSP30990 170 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 NUDT1P36639 197 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 MEOX2P50222 304 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TAS2R39P59534 338 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 RAB8AP61006 207 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 NAA20P61599 178 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CDKL1Q00532 357 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TGFBR3Q03167 851 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CD164Q04900 197 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 OR5I1Q13606 314 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 OR2F1Q13607 317 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TEAD2Q15562 447 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TRAM1Q15629 374 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CCDC6Q16204 474 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 KLHL12Q53G59 568 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CST9Q5W186 159 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 ATRAIDQ6UW56 229 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CREB3L2Q70SY1 520 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 SLC36A1Q7Z2H8 476 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 FAM220AQ7Z4H9 259 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 FAM19A5Q7Z5A7 132 aaPredicted RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 PIGZQ86VD9 579 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 EIF4E3Q8N5X7 224 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 ZNF676Q8N7Q3 588 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 RBMXL3Q8N7X1 1067 aaKnown RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 MAPKAPK5-AS1Q8N8E1 139 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 OR2T33Q8NG76 320 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 OR2Z1Q8NG97 314 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 FAM45AQ8TCE6 357 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 DNASE2BQ8WZ79 361 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 NEUROG1Q92886 237 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 CLDN23Q96B33 292 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 RTP4Q96DX8 246 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 C4orf45Q96LM5 186 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TBX15Q96SF7 602 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 HBEGFQ99075 208 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 ARHGDIGQ99819 225 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 AIF1LQ9BQI0 150 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 AGMATQ9BSE5 352 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 FNDC4Q9H6D8 234 aaPredicted RBP3.43□□□□□ -1.86
VPS41-212ENST00000482217 WDR41Q9HAD4 459 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TMEM30AQ9NV96 361 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 COA4Q9NYJ1 87 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 GNPTGQ9UJJ9 305 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 SLC7A11Q9UPY5 501 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 MOKQ9UQ07 419 aa3.43□□□□□ -1.86
VPS41-212ENST00000482217 TP53TG1Q9Y2A0 90 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms