RNA–Protein interactions for RNA: ENST00000481121.5

NELFE-208, Transcript of negative elongation factor complex member E, humanhuman

TSL 2

Gene NELFE, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-208ENST00000481121 SLC16A9Q7RTY1 509 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 OR13G1Q8NGZ3 307 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 HPS1Q92902 700 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 OR2V2Q96R30 315 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 SLC30A2Q9BRI3 323 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 S100A14Q9HCY8 104 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 DNAJC27Q9NZQ0 273 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 LAMP5Q9UJQ1 280 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 KLHDC2Q9Y2U9 406 aa17.63■□□□□ 0.41
NELFE-208ENST00000481121 SLC22A31A6NKX4 558 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 TBX1O43435 398 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 ALPLP05186 524 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 POLR2IP36954 125 aaKnown RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 ZNF92Q03936 586 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 SLC3A1Q07837 685 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 AVPI1Q5T686 147 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 CLDND2Q8NHS1 167 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 SPRYD4Q8WW59 207 aaPredicted RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 ITLN1Q8WWA0 313 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 MSI2Q96DH6 328 aaKnown RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 TIMD4Q96H15 378 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 IL4I1Q96RQ9 567 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 CNN2Q99439 309 aaKnown RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 YIPF3Q9GZM5 350 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 OPA3Q9H6K4 179 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 SP140LQ9H930 580 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 H2AFY2Q9P0M6 372 aaPredicted RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 C5orf63A6NC05 138 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 XRCC2O43543 280 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 EFNB1P98172 346 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 MVKQ03426 396 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 MEPCEQ7L2J0 689 aaKnown RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 BCDIN3DQ7Z5W3 292 aaKnown RBP17.62■□□□□ 0.41
NELFE-208ENST00000481121 GID4Q8IVV7 300 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 POM121Q96HA1 1249 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 SOX7Q9BT81 388 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 TMEM100Q9NV29 134 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 USE1Q9NZ43 259 aa17.62■□□□□ 0.41
NELFE-208ENST00000481121 MLNRO43193 412 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 ALDH3A2P51648 485 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 RAD23AP54725 363 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 ZNF121P58317 390 aaPredicted RBP17.61■□□□□ 0.41
NELFE-208ENST00000481121 TIGD6Q17RP2 521 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 AADACL4Q5VUY2 407 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 FAM166AQ6J272 317 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 LRRN1Q6UXK5 716 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 FAM57BQ71RH2 274 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 RAB1CQ92928 201 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 STMN2Q93045 179 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 REPIN1Q9BWE0 567 aaKnown RBP17.61■□□□□ 0.41
NELFE-208ENST00000481121 WIPI2Q9Y4P8 454 aa17.61■□□□□ 0.41
NELFE-208ENST00000481121 LOC100289279A0A1B0GTE1 492 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 GGT3PA6NGU5 568 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 CD300LBA8K4G0 201 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 WNT9BO14905 357 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 ALOX5APP20292 161 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 SRP9P49458 86 aaKnown RBP17.6■□□□□ 0.41
NELFE-208ENST00000481121 HCCSP53701 268 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 CDC42P60953 191 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 KCTD18Q6PI47 426 aaPredicted RBP17.6■□□□□ 0.41
NELFE-208ENST00000481121 KRT77Q7Z794 578 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 PEG10Q86TG7 708 aaKnown RBP17.6■□□□□ 0.41
NELFE-208ENST00000481121 PQLC1Q8N2U9 271 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 CBR4Q8N4T8 237 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 OR52H1Q8NGJ2 320 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 C9orf16Q9BUW7 83 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 BRD7Q9NPI1 651 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 PPP1R3CQ9UQK1 317 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 LRP12Q9Y561 859 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 TMEM14AQ9Y6G1 99 aa17.6■□□□□ 0.41
NELFE-208ENST00000481121 H0YL77 283 aa17.59■□□□□ 0.41
NELFE-208ENST00000481121 HLA-DPB1P04440 258 aa17.59■□□□□ 0.41
NELFE-208ENST00000481121 PSMA6P60900 246 aaKnown RBP17.59■□□□□ 0.41
NELFE-208ENST00000481121 PGAM5Q96HS1 289 aa17.59■□□□□ 0.41
NELFE-208ENST00000481121 MEGF10Q96KG7 1140 aa17.59■□□□□ 0.41
NELFE-208ENST00000481121 NIPAL2Q9H841 368 aa17.59■□□□□ 0.41
NELFE-208ENST00000481121 TMEM106BQ9NUM4 274 aa17.59■□□□□ 0.41
NELFE-208ENST00000481121 KCNS2Q9ULS6 477 aa17.59■□□□□ 0.41
NELFE-208ENST00000481121 A0A1B0GWJ7 208 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 ISPDA4D126 451 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 F5H5P2 479 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 TGFAP01135 160 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 CDH15P55291 814 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 GFOD2Q3B7J2 385 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 PRSS45Q7RTY3 260 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 OR56B2PQ8NGI1 322 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 OR8J1Q8NGP2 316 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 FAM81AQ8TBF8 368 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 SPSB4Q96A44 273 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 REEP6Q96HR9 211 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 ADAT1Q9BUB4 502 aaKnown RBP17.58■□□□□ 0.41
NELFE-208ENST00000481121 TTTY10Q9BZA0 68 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 SLC22A4Q9H015 551 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 OR10A2Q9H208 303 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 IMPAD1Q9NX62 359 aa17.58■□□□□ 0.41
NELFE-208ENST00000481121 NOP16Q9Y3C1 178 aaKnown RBP17.58■□□□□ 0.41
NELFE-208ENST00000481121 LMX1BO60663 402 aa17.57■□□□□ 0.4
NELFE-208ENST00000481121 CRLF1O75462 422 aa17.57■□□□□ 0.4
NELFE-208ENST00000481121 HNRNPA0Q13151 305 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms