RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SERPINB5P36952 375 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 WDR4P57081 412 aaKnown RBP9.36□□□□□ -0.91
USP11-208ENST00000480104 NCALDP61601 193 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 OR1Q1Q15612 314 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 FAM27D1Q5T7N8 215 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 TRIML2Q8N7C3 387 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 PLPP7Q8NBV4 271 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 OR9Q1Q8NGQ5 310 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 OR4Q3Q8NH05 313 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 AGR3Q8TD06 166 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 TCP10LQ8TDR4 215 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 APOBEC3DQ96AK3 386 aaPredicted RBP9.36□□□□□ -0.91
USP11-208ENST00000480104 HEXA-AS1Q9H8Q6 139 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 POLE4Q9NR33 117 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 ZFP57Q9NU63 452 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 ZNF229Q9UJW7 825 aa9.36□□□□□ -0.91
USP11-208ENST00000480104 BLOC1S5-TXNDC5H3BN57 136 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 KPNA4O00629 521 aaPredicted RBP9.35□□□□□ -0.91
USP11-208ENST00000480104 RHBDL1O75783 438 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 TFF1P04155 84 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 HIST1H2ABP04908 130 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 CHRNGP07510 517 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 ASAH2BP0C7U1 165 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 IGHV4-30-4P0DP06 118 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 UMPSP11172 480 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 NDUFB7P17568 137 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 CNTFRP26992 372 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 GUCA1AP43080 201 aaPredicted RBP9.35□□□□□ -0.91
USP11-208ENST00000480104 DYNLT3P51808 116 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 MVDP53602 400 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 RPL18Q07020 188 aaKnown RBP9.35□□□□□ -0.91
USP11-208ENST00000480104 DGUOKQ16854 277 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 HIST3H2AQ7L7L0 130 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 ZNF572Q7Z3I7 529 aaPredicted RBP9.35□□□□□ -0.91
USP11-208ENST00000480104 FAM185AQ8N0U4 392 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 BCAS4Q8TDM0 211 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 LRRC29Q8WV35 223 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 HIST1H2ACQ93077 130 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 TMEM27Q9HBJ8 222 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 SLC25A10Q9UBX3 287 aaPredicted RBP9.35□□□□□ -0.91
USP11-208ENST00000480104 PKD1P98161 4303 aa9.35□□□□□ -0.91
USP11-208ENST00000480104 NR2C1P13056 603 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 ETS2P15036 469 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 SPNP16150 400 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 OR3A4PP47883 348 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 MTNR1BP49286 362 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 DSTNP60981 165 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 GK2Q14410 553 aaPredicted RBP9.34□□□□□ -0.91
USP11-208ENST00000480104 SWT1Q5T5J6 900 aaKnown RBP9.34□□□□□ -0.91
USP11-208ENST00000480104 STUMQ69YW2 141 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 ZNF621Q6ZSS3 439 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 OR5T2Q8NGG2 359 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 OR1F12Q8NHA8 337 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 SPRYD4Q8WW59 207 aaPredicted RBP9.34□□□□□ -0.91
USP11-208ENST00000480104 PANX1Q96RD7 426 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 INIPQ9NRY2 104 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 STX18Q9P2W9 335 aaKnown RBP9.34□□□□□ -0.91
USP11-208ENST00000480104 BTNL2Q9UIR0 455 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 SLC13A4Q9UKG4 626 aa9.34□□□□□ -0.91
USP11-208ENST00000480104 NOP16Q9Y3C1 178 aaKnown RBP9.34□□□□□ -0.91
USP11-208ENST00000480104 FAM90A22PA8MWA6 464 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 TPST2O60704 377 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 FGF4P08620 206 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 GP9P14770 177 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 FSTP19883 344 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 SRSF7Q16629 238 aaKnown RBP eCLIP9.33□□□□□ -0.92
USP11-208ENST00000480104 OTPQ5XKR4 325 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 PLBD1Q6P4A8 553 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 GOLGA6L1Q8N7Z2 621 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 OR8U1Q8NH10 309 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 CAPSLQ8WWF8 208 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 TESCQ96BS2 214 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 MALSU1Q96EH3 234 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 GAFA1Q96PS6 74 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 WFDC6Q9BQY6 131 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 ST6GALNAC5Q9BVH7 336 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 RETNQ9HD89 108 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 ASIC5Q9NY37 505 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 ADA2Q9NZK5 511 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 ZNF391Q9UJN7 358 aa9.33□□□□□ -0.92
USP11-208ENST00000480104 GMDSO60547 372 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 KRT75O95678 551 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 AMY1AP04745 511 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 AMY2AP04746 511 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 ARG1P05089 322 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 PGA5P0DJD9 388 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 CDC25BP30305 580 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 AQP2P41181 271 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 ENTPD1P49961 510 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 INSL3P51460 131 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 CAV3P56539 151 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 RGS8P57771 180 aaPredicted RBP9.32□□□□□ -0.92
USP11-208ENST00000480104 EMX2Q04743 252 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 MAD2L1Q13257 205 aaPredicted RBP9.32□□□□□ -0.92
USP11-208ENST00000480104 TOP3AQ13472 1001 aaPredicted RBP9.32□□□□□ -0.92
USP11-208ENST00000480104 HAGHQ16775 308 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 C9orf152Q5JTZ5 239 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 ATPAF1Q5TC12 328 aaPredicted RBP9.32□□□□□ -0.92
USP11-208ENST00000480104 LINC00114Q6XXX2 140 aa9.32□□□□□ -0.92
USP11-208ENST00000480104 ZNF782Q6ZMW2 699 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms