RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ARHGAP11BQ3KRB8 267 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 WDR38Q5JTN6 314 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 ADGRG7Q96K78 797 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 NUDT9Q9BW91 350 aa18.99■□□□□ 0.63
SDF4-206ENST00000478938 DUXAA6NLW8 204 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 SFT2D2O95562 160 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 OR5H8P0DN80 308 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 NID1P14543 1247 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 TAS2R31P59538 309 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 ARSJQ5FYB0 599 aaPredicted RBP18.98■□□□□ 0.63
SDF4-206ENST00000478938 LRRC69Q6ZNQ3 347 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 SLC16A9Q7RTY1 509 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 ADGRE4PQ86SQ3 457 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 CHST4Q8NCG5 386 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 SH3BGRL3Q9H299 93 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 C5orf66Q9H5L9 145 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 LDB3O75112 727 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 TANGO2Q6ICL3 276 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 OPN5Q6U736 354 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 HOGA1Q86XE5 327 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 RNASEH2CQ8TDP1 164 aaKnown RBP18.98■□□□□ 0.63
SDF4-206ENST00000478938 SHDQ96IW2 340 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 FAM210BQ96KR6 192 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 ZNF385AQ96PM9 386 aaKnown RBP18.98■□□□□ 0.63
SDF4-206ENST00000478938 OR11A1Q9GZK7 315 aa18.98■□□□□ 0.63
SDF4-206ENST00000478938 A0A0B4J2E0 115 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 A0A1B0GX12 115 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 DNAJB6O75190 326 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 CA11O75493 328 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 GALTP07902 379 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 HMGA1P17096 107 aaKnown RBP18.97■□□□□ 0.63
SDF4-206ENST00000478938 GNALP38405 381 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 SAPCD1Q5SSQ6 148 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 TXNDC8Q6A555 127 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 TEX38Q6PEX7 206 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 POMZP3Q6PJE2 187 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 PEG10Q86TG7 708 aaKnown RBP18.97■□□□□ 0.63
SDF4-206ENST00000478938 RCBTB1Q8NDN9 531 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 AQP3Q92482 292 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 ZNF681Q96N22 645 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 TAS2R4Q9NYW5 299 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 A0A087WWC5 75 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 PQBP1O60828 265 aaKnown RBP18.97■□□□□ 0.63
SDF4-206ENST00000478938 RPLP1P05386 114 aaKnown RBP18.97■□□□□ 0.63
SDF4-206ENST00000478938 METTL15P1P0C7V9 234 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 PNLIPP16233 465 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 CDKN2AP42771 156 aaKnown RBP18.97■□□□□ 0.63
SDF4-206ENST00000478938 SUPT4H1P63272 117 aaKnown RBP18.97■□□□□ 0.63
SDF4-206ENST00000478938 RAB35Q15286 201 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 TMEM35AQ53FP2 167 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 ZNF619Q8N2I2 560 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 TM7SF3Q9NS93 570 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 PITPNC1Q9UKF7 332 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 SLC22A13Q9Y226 551 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 COLEC10Q9Y6Z7 277 aa18.97■□□□□ 0.63
SDF4-206ENST00000478938 DBIP07108 87 aaKnown RBP18.96■□□□□ 0.63
SDF4-206ENST00000478938 HIST1H1TP22492 207 aaPredicted RBP18.96■□□□□ 0.63
SDF4-206ENST00000478938 RABIFP47224 123 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 RGS19P49795 217 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 IL15RAQ13261 267 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 HIKESHIQ53FT3 197 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 AADACL3Q5VUY0 350 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 NCR3LG1Q68D85 454 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 TMEM183AQ8IXX5 376 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 PLPP5Q8NEB5 264 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 OR51A2Q8NGJ7 313 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 C4orf45Q96LM5 186 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 DIRC2Q96SL1 478 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 LANCL2Q9NS86 450 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 FOXD3Q9UJU5 478 aaPredicted RBP18.96■□□□□ 0.63
SDF4-206ENST00000478938 RCL1Q9Y2P8 373 aaKnown RBP18.96■□□□□ 0.63
SDF4-206ENST00000478938 MYADML2A6NDP7 307 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 HSD17B6O14756 317 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 PHF19Q5T6S3 580 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 AMELYQ99218 206 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 ALPK2Q86TB3 2170 aa18.96■□□□□ 0.63
SDF4-206ENST00000478938 DFFBO76075 338 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 CLN3Q13286 438 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 ZNF260Q3ZCT1 412 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 TMEM225Q6GV28 225 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 SLC35G3Q8N808 338 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 OR6N2Q8NGY6 317 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 SRA1Q9HD15 236 aaKnown RBP18.95■□□□□ 0.62
SDF4-206ENST00000478938 SEMA5BQ9P283 1151 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 HCSTQ9UBK5 93 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 ZNF780BQ9Y6R6 833 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 PPM1FP49593 454 aaPredicted RBP18.95■□□□□ 0.62
SDF4-206ENST00000478938 POLR2LP62875 67 aaKnown RBP18.95■□□□□ 0.62
SDF4-206ENST00000478938 CSNK1G2P78368 415 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 CCL20P78556 96 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 ALG10BQ5I7T1 473 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 BTNL3Q6UXE8 466 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 SYT3Q9BQG1 590 aa18.95■□□□□ 0.62
SDF4-206ENST00000478938 TLCD2A6NGC4 264 aa18.94■□□□□ 0.62
SDF4-206ENST00000478938 K7ESM1 405 aa18.94■□□□□ 0.62
SDF4-206ENST00000478938 RPS4Y1P22090 263 aaKnown RBP18.94■□□□□ 0.62
SDF4-206ENST00000478938 LMO1P25800 156 aa18.94■□□□□ 0.62
SDF4-206ENST00000478938 OR3A1P47881 315 aa18.94■□□□□ 0.62
SDF4-206ENST00000478938 GLO1Q04760 184 aa18.94■□□□□ 0.62
SDF4-206ENST00000478938 HERPUD1Q15011 391 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms