RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 SLC25A15Q9Y619 301 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 ATP23Q9Y6H3 246 aa12.41□□□□□ -0.42
USP11-207ENST00000478596 ZNF878C9JN71 531 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 PTGES3LE9PB15 166 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 H2BFMP0C1H6 154 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 ZFP36P26651 326 aaKnown RBP12.4□□□□□ -0.42
USP11-207ENST00000478596 SLC6A9P48067 706 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 GDI2P50395 445 aaKnown RBP12.4□□□□□ -0.42
USP11-207ENST00000478596 CXCR4P61073 352 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 SNRPD2P62316 118 aaKnown RBP12.4□□□□□ -0.42
USP11-207ENST00000478596 CSNK2BP67870 215 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 RBM48Q5RL73 367 aaKnown RBP12.4□□□□□ -0.42
USP11-207ENST00000478596 KCTD18Q6PI47 426 aaPredicted RBP12.4□□□□□ -0.42
USP11-207ENST00000478596 SYT9Q86SS6 491 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 TEX29Q8N6K0 151 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 ZDHHC22Q8N966 263 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 WDR31Q8NA23 367 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 OTOSQ8NHW6 89 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 SNX33Q8WV41 574 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 ASB17Q8WXJ9 295 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 MYDGFQ969H8 173 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 SLAMF6Q96DU3 332 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
USP11-207ENST00000478596 ATF6BQ99941 703 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 WACQ9BTA9 647 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 MARCH7Q9H992 704 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 NOX3Q9HBY0 568 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 ESM1Q9NQ30 184 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 HAO2Q9NYQ3 351 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 CYB5R1Q9UHQ9 305 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 GTF2A1LQ9UNN4 478 aa12.4□□□□□ -0.42
USP11-207ENST00000478596 ZNF503-AS2A6NEH8 195 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 MYL12BO14950 172 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 KRT8P05787 483 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 OR2T7P0C7T2 308 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 CBR1P16152 277 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 PAX7P23759 505 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 HCCSP53701 268 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 ACTA2P62736 377 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 UBA52P62987 128 aaKnown RBP12.39□□□□□ -0.43
USP11-207ENST00000478596 ACTG2P63267 376 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 PSG4Q00888 419 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 GALK2Q01415 458 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 ELFN2Q5R3F8 820 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 C1QTNF12Q5T7M4 302 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 VASH1Q7L8A9 365 aaPredicted RBP12.39□□□□□ -0.43
USP11-207ENST00000478596 ACBD7Q8N6N7 88 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 SLC30A7Q8NEW0 376 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 OR2T27Q8NH04 317 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 FGFBP3Q8TAT2 258 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 FBLIM1Q8WUP2 373 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 SPTSSAQ969W0 71 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 TMEM186Q96B77 213 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 ABHD6Q9BV23 337 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 WNT5BQ9H1J7 359 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 UNKLQ9H9P5 680 aaKnown RBP12.39□□□□□ -0.43
USP11-207ENST00000478596 HIF1ANQ9NWT6 349 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 ZNF224Q9NZL3 707 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 CNOT2Q9NZN8 540 aaKnown RBP12.39□□□□□ -0.43
USP11-207ENST00000478596 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
USP11-207ENST00000478596 ARFGEF3Q5TH69 2177 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 A0A1W2PQL4 384 aaPredicted RBP12.38□□□□□ -0.43
USP11-207ENST00000478596 C5orf49A4QMS7 147 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 OR6C6A6NF89 314 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 POM121CA8CG34 1229 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 PSMD9O00233 223 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 CELA3BP08861 270 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 MMP7P09237 267 aaPredicted RBP12.38□□□□□ -0.43
USP11-207ENST00000478596 CCDC159P0C7I6 412 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 PSKH1P11801 424 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 STOMP27105 288 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 SLC15A1P46059 708 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 GRB2P62993 217 aaKnown RBP12.38□□□□□ -0.43
USP11-207ENST00000478596 ST3GAL4Q11206 333 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 ECH1Q13011 328 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 TEX30Q5JUR7 227 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 ZNF322Q6U7Q0 402 aaPredicted RBP12.38□□□□□ -0.43
USP11-207ENST00000478596 LRRN1Q6UXK5 716 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 ZNF283Q8N7M2 679 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 YIPF7Q8N8F6 280 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 OR1F12Q8NHA8 337 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 TMEM80Q96HE8 168 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 MS4A3Q96HJ5 214 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 VRK1Q99986 396 aaPredicted RBP12.38□□□□□ -0.43
USP11-207ENST00000478596 ALG8Q9BVK2 526 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 MROQ9BYG7 248 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 SLITRK2Q9H156 845 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 GNG8Q9UK08 70 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 COPS3Q9UNS2 423 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 MYRFQ9Y2G1 1151 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 KLHDC2Q9Y2U9 406 aa12.38□□□□□ -0.43
USP11-207ENST00000478596 EXOSC1Q9Y3B2 195 aaKnown RBP12.38□□□□□ -0.43
USP11-207ENST00000478596 IGHV1-18A0A0C4DH31 117 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 F5H5K5 113 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 RGS10O43665 173 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 CRYAAP02489 173 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 CECR9P0C854 216 aa12.37□□□□□ -0.43
USP11-207ENST00000478596 PIPP12273 146 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms