RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 PLSCR5A0PG75 271 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 LINC00862A6NCI5 91 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 H3BUI4 141 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 CHRM2P08172 466 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 UBBP0CG47 229 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 CD59P13987 128 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 SRD5A2P31213 254 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 SFTPDP35247 375 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 CSNK1A1P48729 337 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 UNC119Q13432 240 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 OR52N4Q8NGI2 321 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 NABP1Q96AH0 204 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 SEC61A2Q9H9S3 476 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 BEX1Q9HBH7 125 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 DKKL1Q9UK85 242 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 POLR1DQ9Y2S0 133 aa10.79□□□□□ -0.68
PTPRF-212ENST00000477970 HMSDA8MTL9 139 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 RAB3DO95716 219 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF20P17024 532 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 OTX1P32242 354 aaPredicted RBP10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ALDH3B1P43353 468 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 CLDN17P56750 224 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF121P58317 390 aaPredicted RBP10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF627Q7L945 461 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 OR5AS1Q8N127 324 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 CA10Q9NS85 328 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ASH2LQ9UBL3 628 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 CYB5AP00167 134 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 CX3CR1P49238 355 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 B3GALT5-AS1P59052 145 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 SRSF4Q08170 494 aaKnown RBP10.78□□□□□ -0.68
PTPRF-212ENST00000477970 TAF13Q15543 124 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 DCAF12Q5T6F0 453 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 PPP1R32Q7Z5V6 425 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF680Q8NEM1 530 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 GJC3Q8NFK1 279 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 OR9K2Q8NGE7 335 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 OR51E1Q8TCB6 317 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 RELTQ969Z4 430 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 DDA1Q9BW61 102 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF160Q9HCG1 818 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 GHRLQ9UBU3 117 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 KLK13Q9UKR3 277 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 CABIN1Q9Y6J0 2220 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 WIPF3A6NGB9 483 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 SLC22A5O76082 557 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 APOC1P02654 83 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 CEACAM1P13688 526 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 CDAP32320 146 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 MOGAT2Q3SYC2 334 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 C20orf196Q8IYI0 205 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 BEST3Q8N1M1 668 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 OR2AK2Q8NG84 335 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 OR14K1Q8NGZ2 314 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 MARVELD3Q96A59 401 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 V9GYS6 101 aa10.78□□□□□ -0.68
PTPRF-212ENST00000477970 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.68
PTPRF-212ENST00000477970 ZNF736B4DX44 427 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 IFNA7P01567 189 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 PRF1P14222 555 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 NAT1P18440 290 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF93P35789 620 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 GNALP38405 381 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 EIF1AXP47813 144 aaKnown RBP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 ENDOGQ14249 297 aaKnown RBP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 SSPNQ14714 243 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 TMEM156Q8N614 296 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 PRRT1Q99946 306 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 FAM117AQ9C073 453 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 ZFHX2Q9C0A1 2572 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 GVINP1Q7Z2Y8 2422 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 DISC1C4P0D8 188 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 CARD17Q5XLA6 110 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 ZDHHC22Q8N966 263 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 OR8H1Q8NGG4 311 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 C1orf147Q96MC9 270 aaPredicted RBP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF416Q9BWM5 594 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 EIF3KQ9UBQ5 218 aaKnown RBP10.77□□□□□ -0.69
PTPRF-212ENST00000477970 OPN4Q9UHM6 478 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 EML6Q6ZMW3 1958 aa10.77□□□□□ -0.69
PTPRF-212ENST00000477970 NPIPA2E9PIF3 369 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 NPIPA3F8WFD2 350 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 RER1O15258 196 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 GSTP1P09211 210 aaKnown RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 THBS4P35443 961 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 RAC3P60763 192 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 RAET1LQ5VY80 246 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 FAHD2BQ6P2I3 314 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 ZNF584Q8IVC4 421 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 OR10R2Q8NGX6 335 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 FAHD2AQ96GK7 314 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 SPRY4Q9C004 299 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 CLEC4MQ9H2X3 399 aaPredicted RBP10.76□□□□□ -0.69
PTPRF-212ENST00000477970 EXO5Q9H790 373 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 GPR84Q9NQS5 396 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 TCFL5Q9UL49 500 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 OR14I1A6ND48 311 aa10.76□□□□□ -0.69
PTPRF-212ENST00000477970 DHRS7CA6NNS2 312 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms