RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 OR52E2Q8NGJ4 325 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 MOSPD2Q8NHP6 518 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 OSR1Q8TAX0 266 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ST7LQ8TDW4 575 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ITLN1Q8WWA0 313 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 UPRTQ96BW1 309 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TIMD4Q96H15 378 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ITCHQ96J02 903 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 MCHR1Q99705 422 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 GPA33Q99795 319 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 RBM4BQ9BQ04 359 aaKnown RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF426Q9BUY5 554 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM109Q9BVC6 243 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ROPN1BQ9BZX4 212 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 RNF121Q9H920 327 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 MARCH7Q9H992 704 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 ROPN1Q9HAT0 212 aaPredicted RBP3.79□□□□□ -1.8
CKS1B-207ENST00000477676 SMURF2Q9HAU4 748 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM165Q9HC07 324 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TNFRSF19Q9NS68 423 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM106BQ9NUM4 274 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 FBXL3Q9UKT7 428 aa3.79□□□□□ -1.8
CKS1B-207ENST00000477676 TENM2Q9NT68 2774 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 IGHV2-70DA0A0C4DH43 119 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 IGHV3-64DA0A0J9YX35 117 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 IQCMA0A1B0GVH7 501 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 CPSF4LA6NMK7 179 aaKnown RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 SRRM5B3KS81 715 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 G3V4G9 280 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 H3BNX3 289 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM178BH3BS89 294 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 HDAC3O15379 428 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 RNF13O43567 381 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 CHP2O43745 196 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 RRP9O43818 475 aaKnown RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 NDUFA7O95182 113 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ANP32DO95626 131 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 CYB5R3P00387 301 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 MT-ATP6P00846 226 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 OPN1SWP03999 348 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 SFTPBP07988 381 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 MELTFP08582 738 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 PPIAL4GP0DN37 164 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 IDO1P14902 403 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ACADSP16219 412 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 LAP3P28838 519 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 APLNRP35414 380 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 AQP2P41181 271 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 SELENOVP59797 346 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 BTG1P62324 171 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ERVK-25P63136 954 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 MRPS34P82930 218 aaKnown RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 TNFAIP6P98066 277 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 RPL18Q07020 188 aaKnown RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 LRRC74AQ0VAA2 488 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 FADDQ13158 208 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 SCARB2Q14108 478 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ENDOGQ14249 297 aaKnown RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 KRTAP27-1Q3LI81 207 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 SLC36A2Q495M3 483 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM155Q4W5P6 130 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 RUNDC3AQ59EK9 446 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ENTPD8Q5MY95 495 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 C6orf10Q5SRN2 563 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 GCNT6Q5T4J0 391 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ATPAF1Q5TC12 328 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 HHATQ5VTY9 493 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 REEP3Q6NUK4 255 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 MZT2BQ6NZ67 158 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF613Q6PF04 617 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 FIP1L1Q6UN15 594 aaKnown RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 LYPD2Q6UXB3 125 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 DLEU7Q6UYE1 221 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF841Q6ZN19 808 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 MSANTD1Q6ZTZ1 278 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 FOXL2NBQ6ZUU3 175 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 RANBP3LQ86VV4 465 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 NKAIN4Q8IVV8 208 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 IZUMO1Q8IYV9 350 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 C10orf53Q8N6V4 93 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 NRACQ8N912 160 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 OR10S1Q8NGN2 331 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 OR1J2Q8NGS2 313 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 PFN4Q8NHR9 129 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 LINC01006Q8NI28 216 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF420Q8TAQ5 688 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ADAMTS16Q8TE57 1224 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 SLC7A6Q92536 515 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 TBX15Q96SF7 602 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ZNF607Q96SK3 696 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ZBTB18Q99592 522 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 EPYCQ99645 322 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM246Q9BRR3 403 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 OR2H1Q9GZK4 316 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 MS4A7Q9GZW8 240 aaPredicted RBP3.78□□□□□ -1.8
CKS1B-207ENST00000477676 MMP27Q9H306 513 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 C1orf198Q9H425 327 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 RAD21L1Q9H4I0 556 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 TMEM38AQ9H6F2 299 aa3.78□□□□□ -1.8
CKS1B-207ENST00000477676 ARMC7Q9H6L4 198 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms