RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 MDH2P40926 338 aaKnown RBP9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 GRB2P62993 217 aaKnown RBP9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 EIF2B1Q14232 305 aaKnown RBP9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 SNAI3Q3KNW1 292 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 LINC01590Q5TEZ4 76 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 DCAF12L2Q5VW00 463 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 LIPNQ5VXI9 398 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 ZNF771Q7L3S4 317 aaPredicted RBP9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 TMEM179BQ7Z7N9 219 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 ERI1Q8IV48 349 aaKnown RBP9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 DNAJC9Q8WXX5 260 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 MEGF10Q96KG7 1140 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 SIGLEC11Q96RL6 698 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 SLC22A4Q9H015 551 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 TOR3AQ9H497 397 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 METTL17Q9H7H0 456 aaPredicted RBP9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 G6PC2Q9NQR9 355 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 CENPMQ9NSP4 180 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
NUDCD3-206ENST00000475952 A0A1B0GWJ7 208 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 GGT3PA6NGU5 568 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PRR23D1E9PI22 279 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 F5H5P2 479 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 H0YL77 283 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 TMEM178BH3BS89 294 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 GSC2O15499 205 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PRODHO43272 600 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 XRCC2O43543 280 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 ATP5HO75947 161 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 APOC1P02654 83 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 HLA-DPB1P04440 258 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 HMGN1P05114 100 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 SBK2P0C263 348 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PRR23D2P0DMB1 279 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 IRF2P14316 349 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 GSTT1P30711 240 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PRKXP51817 358 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PRSS12P56730 875 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 GINS1Q14691 196 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 ZMYND11Q15326 602 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 ZNF181Q2M3W8 571 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 SHFQ7M4L6 423 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 DPY19L4Q7Z388 723 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 NAA40Q86UY6 237 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 HS3ST5Q8IZT8 346 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 C1orf87Q8N0U7 546 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 CELF2-AS1Q8N7Q2 184 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PAPD5Q8NDF8 572 aaKnown RBP9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 OR2AE1Q8NHA4 323 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 ZNF420Q8TAQ5 688 aaPredicted RBP9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 ERGIC1Q969X5 290 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PLEKHA8Q96JA3 519 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 CADM1Q9BY67 442 aaKnown RBP9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 OR51V1Q9H2C8 321 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 SP140LQ9H930 580 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 MED20Q9H944 212 aa9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PATZ1Q9HBE1 687 aaKnown RBP9.59□□□□□ -0.87
NUDCD3-206ENST00000475952 PRKDCP78527 4128 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 CMYA5Q8N3K9 4069 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 PPIAL4EA0A075B759 164 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 PPIAL4CA0A0B4J2A2 164 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 PPIAL4DF5H284 164 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 CYB5R3P00387 301 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 ANXA2P07355 339 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 PPIAL4FP0DN26 164 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 CD200P41217 278 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 GATA4P43694 442 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 CX3CR1P49238 355 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 LCN2P80188 198 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 ZNF92Q03936 586 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 BNIP1Q12981 228 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 OR8G1Q15617 311 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 ESCO2Q56NI9 601 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 GLYATL3Q5SZD4 288 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 PLBD1Q6P4A8 553 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 SPATC1Q76KD6 591 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 RHOUQ7L0Q8 258 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 MOGAT3Q86VF5 341 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 LRRC28Q86X40 367 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 OR11L1Q8NGX0 322 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 NRBF2Q96F24 287 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 ADAT1Q9BUB4 502 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 PRRG3Q9BZD7 231 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 MMADHCQ9H3L0 296 aaPredicted RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 MARCH7Q9H992 704 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 SLC25A19Q9HC21 320 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 PAPOLBQ9NRJ5 636 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 MRPL15Q9P015 296 aaKnown RBP9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 N6AMT1Q9Y5N5 214 aa9.58□□□□□ -0.88
NUDCD3-206ENST00000475952 LOC105371242A0A075B767 164 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 CD300LBA8K4G0 201 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 A8MXK9 166 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 TBX1O43435 398 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 TIPRLO75663 272 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 LYNP07948 512 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 SLC2A1P11166 492 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 RPS2P15880 293 aaKnown RBP9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 PRKACGP22612 351 aa9.57□□□□□ -0.88
NUDCD3-206ENST00000475952 CA6P23280 308 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms