RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TRAP1Q12931 704 aaKnown RBP8.99□□□□□ -0.97
CDRT1-205ENST00000475944 KRT72Q14CN4 511 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 OR8B8Q15620 311 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 MPPED2Q15777 294 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 SFRP4Q6FHJ7 346 aaPredicted RBP8.99□□□□□ -0.97
CDRT1-205ENST00000475944 TSEN54Q7Z6J9 526 aaKnown RBP8.99□□□□□ -0.97
CDRT1-205ENST00000475944 OR6V1Q8N148 313 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 PLPP7Q8NBV4 271 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 FANK1Q8TC84 345 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 UBE2FQ969M7 185 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 WDFY2Q96P53 400 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 TBX15Q96SF7 602 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 NMNAT3Q96T66 252 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 KCTD14Q9BQ13 255 aaPredicted RBP8.99□□□□□ -0.97
CDRT1-205ENST00000475944 ADAT1Q9BUB4 502 aaKnown RBP8.99□□□□□ -0.97
CDRT1-205ENST00000475944 NDUFAF4Q9P032 175 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 ARMCX1Q9P291 453 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 CTSZQ9UBR2 303 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 RNF114Q9Y508 228 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 DOCK11Q5JSL3 2073 aa8.99□□□□□ -0.97
CDRT1-205ENST00000475944 TRAV38-1A0A0B4J264 116 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 TRBV4-1A0A0J9YWV2 114 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 CD300LBA8K4G0 201 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 M0R135 149 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 ARPC3O15145 178 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 GMDSO60547 372 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 PTBP3O95758 552 aaKnown RBP8.98□□□□□ -0.97
CDRT1-205ENST00000475944 HLA-DQA2P01906 255 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 COX4I1P13073 169 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 NCK1P16333 377 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 HIST1H1CP16403 213 aaKnown RBP8.98□□□□□ -0.97
CDRT1-205ENST00000475944 CA6P23280 308 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 NOS3P29474 1203 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 GGT2P36268 569 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 SEC23BQ15437 767 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 C11orf91Q3C1V1 193 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 CGB2Q6NT52 195 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 NAA40Q86UY6 237 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 ZBTB46Q86UZ6 589 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 BOLLQ8N9W6 283 aaKnown RBP8.98□□□□□ -0.97
CDRT1-205ENST00000475944 SPERTQ8NA61 448 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 SCCPDHQ8NBX0 429 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 SPTSSAQ969W0 71 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 ZNF799Q96GE5 643 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 DHRS1Q96LJ7 313 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 OR52D1Q9H346 318 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 EFCAB1Q9HAE3 211 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 RPRD1BQ9NQG5 326 aaKnown RBP8.98□□□□□ -0.97
CDRT1-205ENST00000475944 ARGLU1Q9NWB6 273 aaPredicted RBP8.98□□□□□ -0.97
CDRT1-205ENST00000475944 CYB5R1Q9UHQ9 305 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 KCNG2Q9UJ96 466 aa8.98□□□□□ -0.97
CDRT1-205ENST00000475944 SAMD4AQ9UPU9 718 aaKnown RBP8.98□□□□□ -0.97
CDRT1-205ENST00000475944 IGHV1-69DA0A0B4J2H0 117 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.97□□□□□ -0.97
CDRT1-205ENST00000475944 OOEPA6NGQ2 149 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 GGT3PA6NGU5 568 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 C3orf80F5H4A9 247 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 IDH3BO43837 385 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 GPR137BO60478 399 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 ECDO95905 644 aaPredicted RBP8.97□□□□□ -0.97
CDRT1-205ENST00000475944 IGHV1-69P01742 117 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 SMIM11AP58511 58 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 MZT1Q08AG7 82 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 TAF9Q16594 264 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 RFX4Q33E94 735 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 C8orf82Q6P1X6 216 aaPredicted RBP8.97□□□□□ -0.97
CDRT1-205ENST00000475944 RHOUQ7L0Q8 258 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 LDLRAD3Q86YD5 345 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 OR4K13Q8NH42 304 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 OR52J3Q8NH60 311 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 LINC01006Q8NI28 216 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 LRTOMTQ8WZ04 291 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 LHX4Q969G2 390 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 C7orf34Q96L11 122 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 RBM4BQ9BQ04 359 aaKnown RBP8.97□□□□□ -0.97
CDRT1-205ENST00000475944 IFT27Q9BW83 186 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 SIRPDQ9H106 197 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 SMURF1Q9HCE7 757 aa8.97□□□□□ -0.97
CDRT1-205ENST00000475944 PNRC2Q9NPJ4 139 aaKnown RBP8.97□□□□□ -0.97
CDRT1-205ENST00000475944 hCG_1807616A0A1W2PRN6 198 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 A6NLC8 198 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 CCDC22O60826 627 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 GMNNO75496 209 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 CLPXO76031 633 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 DIRAS1O95057 198 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 GADD45GO95257 159 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 IGHV4-59P01825 116 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 GYPAP02724 150 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 ZNF823P16415 610 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 NUDT2P50583 147 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 ARF6P62330 175 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 HOXA4Q00056 320 aaPredicted RBP8.96□□□□□ -0.98
CDRT1-205ENST00000475944 ZNF92Q03936 586 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 SNAI3Q3KNW1 292 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 GLYATQ6IB77 296 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 ASPHD2Q6ICH7 369 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 DRAM2Q6UX65 266 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 HACD2Q6Y1H2 254 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 GDPGP1Q6ZNW5 385 aa8.96□□□□□ -0.98
CDRT1-205ENST00000475944 BTN2A1Q7KYR7 527 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms