RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SPAG7O75391 227 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 HPRT1P00492 218 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 CATP04040 527 aaKnown RBP3.66□□□□□ -1.82
SMC5-203ENST00000475540 RAB4AP20338 218 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 RAB5AP20339 215 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 P2RY2P41231 377 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 RPS9P46781 194 aaKnown RBP3.66□□□□□ -1.82
SMC5-203ENST00000475540 CSNK1A1P48729 337 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 SERPINB8P50452 374 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 TAS2R39P59534 338 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 VSNL1P62760 191 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 UBE2IP63279 158 aaKnown RBP3.66□□□□□ -1.82
SMC5-203ENST00000475540 SEMG2Q02383 582 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 PMS2P3Q13401 168 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 MAPRE2Q15555 327 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 ZNF726P1Q15940 193 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 DUPD1Q68J44 220 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 APOBEC3HQ6NTF7 200 aaKnown RBP3.66□□□□□ -1.82
SMC5-203ENST00000475540 NPSR1Q6W5P4 371 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 HORMAD1Q86X24 394 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 ZADH2Q8N4Q0 377 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 OR4F15Q8NGB8 312 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 OR1N2Q8NGR9 330 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 ZNF721Q8TF20 911 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 RCN3Q96D15 328 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 C8orf76Q96K31 380 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 CTRCQ99895 268 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 AGMATQ9BSE5 352 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 TIMM29Q9BSF4 260 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 TPK1Q9H3S4 243 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 TMEM9BQ9NQ34 198 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 SLC25A37Q9NYZ2 338 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 VAPAQ9P0L0 249 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 MROH7Q68CQ1 1323 aa3.66□□□□□ -1.82
SMC5-203ENST00000475540 LRPPRCP42704 1394 aaKnown RBP3.65□□□□□ -1.82
SMC5-203ENST00000475540 KIR2DL5BA0A0G2JN68 375 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 KIR2DL5BA0A0G2JPC4 375 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 C11orf94C9JXX5 98 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 F8VP50 259 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 TOR1AO14656 332 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 GATCO43716 136 aaKnown RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 FOXH1O75593 365 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 CRTAPO75718 401 aaPredicted RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 SRP72O76094 671 aaKnown RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 LDOC1O95751 146 aaPredicted RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 AIFM1O95831 613 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 CSNK2A2P19784 350 aaPredicted RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 NMUP48645 174 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 MNAT1P51948 309 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 ZNF136P52737 540 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 OR2B6P58173 313 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 NUTF2P61970 127 aaKnown RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 SLC39A6Q13433 755 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 AQP6Q13520 282 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 FAM71E1Q6IPT2 247 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 TMEM179Q6ZVK1 233 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 MBOAT2Q6ZWT7 520 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 SSX6Q7RTT6 188 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 KIR2DL5AQ8N109 375 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 NPBQ8NG41 125 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 TNFRSF14Q92956 283 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 TMEM230Q96A57 120 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 ZNF396Q96N95 335 aaPredicted RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 MICU1Q9BPX6 476 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 ANGPTL4Q9BY76 406 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 RPF2Q9H7B2 306 aaKnown RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 EURLQ9NYK6 297 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 NKIRAS1Q9NYS0 192 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 DEC1Q9P2X7 70 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 NXT1Q9UKK6 140 aaKnown RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 SLC22A14Q9Y267 594 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 FADS3Q9Y5Q0 445 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 SLC25A15Q9Y619 301 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 GAKO14976 1311 aa3.65□□□□□ -1.83
SMC5-203ENST00000475540 PHF3Q92576 2039 aaKnown RBP3.65□□□□□ -1.83
SMC5-203ENST00000475540 A0A0A6YYD5 115 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 IGKV1D-13A0A0B4J2D9 117 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 C1orf232A0A0U1RR37 186 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 A0A1B0GVI7 797 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 ANKRD20A5PA0PJZ0 165 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 SEC14L6B5MCN3 397 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 H7C2Y5 167 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 GOLGA8RI6L899 631 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 NME4O00746 187 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 TRAPPC6AO75865 159 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 OXTP01178 125 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 IGKV1-13P0DP09 117 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 F2RP25116 425 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 PSMB6P28072 239 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 CD40LGP29965 261 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 MXD1Q05195 221 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 PSG5Q15238 335 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 NDUFAF6Q330K2 333 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 FRMPD2BQ6IN97 320 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 FAHD1Q6P587 224 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 C12orf54Q6X4T0 127 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 CAMK2N1Q7Z7J9 78 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 MREGQ8N565 214 aa3.64□□□□□ -1.83
SMC5-203ENST00000475540 CYB561A3Q8NBI2 242 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms