RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 IGKV1D-16P01601 117 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TRGC1P0CF51 173 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ANOS1P23352 680 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CPT2P23786 658 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 FPR2P25090 351 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 APLNRP35414 380 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ID4P47928 161 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PSEN2P49810 448 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ACTBP60709 375 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ACTG1P63261 375 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PCGF3Q3KNV8 242 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 SDHAF4Q5VUM1 108 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 WDR25Q64LD2 544 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 TMEM215Q68D42 235 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 LEG1Q6P5S2 330 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OLIG3Q7RTU3 272 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ADIPOR2Q86V24 386 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ZNF610Q8N9Z0 462 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CASTOR1Q8WTX7 329 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CA5BP1Q8WTZ4 195 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TMEM239Q8WW34 195 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ACY3Q96HD9 319 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 FNDC11Q9BVV2 318 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 SRD5A3Q9H8P0 318 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MTHFD2LQ9H903 347 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 CAPN10Q9HC96 672 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 STARD7Q9NQZ5 370 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ZC4H2Q9NQZ6 224 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MRPL22Q9NWU5 206 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 CALML5Q9NZT1 146 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 SUSD2Q9UGT4 822 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MSRAQ9UJ68 235 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PITPNC1Q9UKF7 332 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 FBXL21Q9UKT6 434 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 C19orf53Q9UNZ5 99 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 FUT9Q9Y231 359 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CHD7Q9P2D1 2997 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 KIF26BQ2KJY2 2108 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MYOFQ9NZM1 2061 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 LEFTY2O00292 366 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 DCTN6O00399 190 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 KCNAB3O43448 404 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 FADS1O60427 444 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MED6O75586 246 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 RAD51DO75771 328 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 LY86O95711 162 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 EOMESO95936 686 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 RLN1P04808 185 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 HMGN2P05204 90 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 KLK1P06870 262 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CTSSP25774 331 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PSMB5P28074 263 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CDKN2AP42771 156 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 NPBWR2P48146 333 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ANXA11P50995 505 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 PRKXP51817 358 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 SLC37A1P57057 533 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR2B8PP59922 312 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR1Q1Q15612 314 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MLF2Q15773 248 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 PRICKLE4Q2TBC4 344 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 NDUFAF6Q330K2 333 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TMEM128Q5BJH2 165 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TCEAL6Q6IPX3 200 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PTCRAQ6ISU1 281 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 ABHD17CQ6PCB6 329 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ULK3Q6PHR2 472 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TMEM205Q6UW68 189 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CLEC18BQ6UXF7 455 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 FOXL2NBQ6ZUU3 175 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 RANBP3LQ86VV4 465 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 MEX3DQ86XN8 651 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 ARL14Q8N4G2 192 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TTC16Q8NEE8 873 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR7G2Q8NG99 324 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR4F17Q8NGA8 305 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR9A1PQ8NGU1 263 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ORAOV1Q8WV07 137 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 CCDC107Q8WV48 283 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ERGIC1Q969X5 290 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 MSI2Q96DH6 328 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 C16orf58Q96GQ5 468 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 AKR1E2Q96JD6 320 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 SLC35G5Q96KT7 338 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 OR4F4Q96R69 305 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 AMELYQ99218 206 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 ADAM2Q99965 735 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 C6orf106Q9H6K1 298 aaPredicted RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 HES4Q9HCC6 221 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 SEPSECSQ9HD40 501 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 DZANK1Q9NVP4 752 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 PTGFRNQ9P2B2 879 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 GTF2A1LQ9UNN4 478 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 STRAPQ9Y3F4 350 aaKnown RBP3.61□□□□□ -1.83
USP16-205ENST00000474835 FXYD6-FXYD2A0A087WZ82 144 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 TRAV39A0A0B4J263 110 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 LOC102723971A0A1B0GUV8 181 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 A0A1W2PPE2 198 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 KANTRA0A1W2PQU2 76 aa3.61□□□□□ -1.83
USP16-205ENST00000474835 DAPL1A0PJW8 107 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms