RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 NTSP30990 170 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 AKT2P31751 481 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CHI3L1P36222 383 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 GGT2P36268 569 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 HSD17B2P37059 387 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CD79BP40259 229 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 MAP3K8P41279 467 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 GPR4P46093 362 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 RPL5P46777 297 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CCT3P49368 545 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 EMDP50402 254 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ASCL1P50553 236 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF136P52737 540 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CRISP3P54108 245 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 RAD23AP54725 363 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 UGT2B15P54855 530 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CLDN15P56746 228 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 RAB38P57729 211 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NUP107P57740 925 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 VSX2P58304 361 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FXYD6P3P58550 94 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 STARD6P59095 220 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 STXBP1P61764 594 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 RPS15AP62244 130 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SELENOWP63302 87 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 BTN3A2P78410 334 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 HOXC5Q00444 222 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 IL5RAQ01344 420 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 IL1RL1Q01638 556 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CSTF1Q05048 431 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FADDQ13158 208 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SLAMF1Q13291 335 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SPCS2Q15005 226 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 EXOSC7Q15024 291 aaKnown RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NEDD8Q15843 81 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SSX1Q16384 188 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NNATQ16517 81 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 MAPK14Q16539 360 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF630Q2M218 657 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DEFB133Q30KQ1 61 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NDUFAF6Q330K2 333 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ANKDD1AQ495B1 522 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DEFB134Q4QY38 66 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LBHQ53QV2 105 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FGD3Q5JSP0 725 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DCST2Q5T1A1 773 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LINC00242Q5T6M2 205 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ANXA8L1Q5VT79 327 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 GPR107Q5VW38 600 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NKAIN2Q5VXU1 208 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM236Q5W0B7 351 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CST9LP1Q5W188 147 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 C12orf73Q69YU5 71 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 HIST2H2AA3Q6FI13 130 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 OR4A47Q6IF82 309 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TRIM40Q6P9F5 258 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 PODNL1Q6PEZ8 512 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DHRS4L2Q6PKH6 230 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ANGPTL8Q6UXH0 198 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FAM92BQ6ZTR7 304 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 COX15Q7KZN9 410 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LPCAT2Q7L5N7 544 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 KRT74Q7RTS7 529 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 PAGE2Q7Z2X7 111 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 C6orf120Q7Z4R8 191 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 GPR141Q7Z602 305 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TAF8Q7Z7C8 310 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 OOSP2Q86WS3 158 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 C17orf82Q86X59 251 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 HIPK1Q86Z02 1210 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CLVS1Q8IUQ0 354 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 C8orf59Q8N0T1 100 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LRRC25Q8N386 305 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SVOPLQ8N434 492 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ARL14Q8N4G2 192 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 DHRSXQ8N5I4 330 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TBC1D19Q8N5T2 526 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CSNK1A1LQ8N752 337 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF321PQ8N8H1 164 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ARL10Q8N8L6 244 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TTC29Q8NA56 475 aaPredicted RBP1.16□□□□□ -2.22
CCDC39-203ENST00000473854 CAMKVQ8NCB2 501 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 BPIFB6Q8NFQ5 453 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TSTD1Q8NFU3 115 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 TTLQ8NG68 377 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 OR4E2Q8NGC2 313 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 OR6T1Q8NGN1 323 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 OR9A4Q8NGU2 314 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 OR52J3Q8NH60 311 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 PFN4Q8NHR9 129 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 NDNFQ8TB73 568 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 FAM81AQ8TBF8 368 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 SLC7A13Q8TCU3 470 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF675Q8TD23 568 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LMX1AQ8TE12 382 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ADAMTS16Q8TE57 1224 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 KCNE4Q8WWG9 221 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 LCN9Q8WX39 176 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 ROBO4Q8WZ75 1007 aa1.16□□□□□ -2.22
CCDC39-203ENST00000473854 PIK3R3Q92569 461 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms