RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 UBL3O95164 117 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 HLA-DQB1P01920 261 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 FAHP16930 419 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ZNF20P17024 532 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 HTR2CP28335 458 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 DCTDP32321 178 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 HTR5AP47898 357 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 PTH2RP49190 550 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ART1P52961 327 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 GRB2P62993 217 aaKnown RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 HIST1H3AP68431 136 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 NHLH1Q02575 133 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 GUCA2AQ02747 115 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 C11orf91Q3C1V1 193 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 SLC36A2Q495M3 483 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 HIST2H3PS2Q5TEC6 136 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 FAM166AQ6J272 317 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 FAAP20Q6NZ36 180 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 HIST2H3AQ71DI3 136 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 SIAH3Q8IW03 269 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 MCEMP1Q8IX19 187 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 OR1M1Q8NGA1 313 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 OR5D18Q8NGL1 313 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ENKURQ8TC29 256 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 HPS1Q92902 700 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 SLC25A28Q96A46 364 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 RNF170Q96K19 258 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 SLC22A4Q9H015 551 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 WNT5BQ9H1J7 359 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ABCG5Q9H222 651 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 NIPAL2Q9H841 368 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 CNTD2Q9H8S5 307 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 NOX3Q9HBY0 568 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 RYDENQ9NUL5 291 aaKnown RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 PAQR5Q9NXK6 330 aaPredicted RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 ZNF224Q9NZL3 707 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 KLK11Q9UBX7 282 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ELF5Q9UKW6 265 aaPredicted RBP5.45□□□□□ -1.54
CLK1-210ENST00000473565 NBEAQ8NFP9 2946 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 ATRXP46100 2492 aa5.45□□□□□ -1.54
CLK1-210ENST00000473565 SLC22A20A6NK97 555 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 SYNGR3O43761 229 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 MT-ND4P03905 459 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CALCBP10092 127 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 FSTP19883 344 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CCNOP22674 350 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 TAS2R20P59543 309 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 MOGAT2Q3SYC2 334 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 PABPC1L2AQ5JQF8 200 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 GLT8D1Q68CQ7 371 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 ZNF554Q86TJ5 538 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CPEB3Q8NE35 698 aaKnown RBP5.44□□□□□ -1.54
CLK1-210ENST00000473565 OR1F12Q8NHA8 337 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 SETD6Q8TBK2 473 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 APH1AQ96BI3 265 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 S100A16Q96FQ6 103 aaKnown RBP5.44□□□□□ -1.54
CLK1-210ENST00000473565 SCNM1Q9BWG6 230 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 IGKV1-9A0A0C4DH69 117 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 FAM240BA0A1B0GVZ2 78 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CTAG2O75638 210 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 ACTL6AO96019 429 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 LCATP04180 440 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 YES1P07947 543 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CST2P09228 141 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 ARSBP15848 533 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 BDKRB2P30411 391 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 GDNFP39905 211 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 TMEM255AQ5JRV8 349 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 RSBN1Q5VWQ0 802 aaPredicted RBP5.44□□□□□ -1.54
CLK1-210ENST00000473565 IGFL2Q6UWQ7 119 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 ZNF100Q8IYN0 542 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 OR5AS1Q8N127 324 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 OR14K1Q8NGZ2 314 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 TMEM45BQ96B21 275 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 SGK3Q96BR1 496 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 UPRTQ96BW1 309 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 HAVCR1Q96D42 359 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CMBLQ96DG6 245 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 OR2H1Q9GZK4 316 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 IRF2BPLQ9H1B7 796 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 ATG5Q9H1Y0 275 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 PLEKHA1Q9HB21 404 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 EMC3Q9P0I2 261 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 UPB1Q9UBR1 384 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 RHBDD3Q9Y3P4 386 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 PCNX1Q96RV3 2341 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 TRAV18A0A075B6X5 111 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 TRAV17A0A0B4J275 112 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 LOC100289279A0A1B0GTE1 492 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 A0A1W2PP11 408 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 A0A1W2PR80 420 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 ORC5O43913 435 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 GFRA3O60609 400 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CD79AP11912 226 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 CRYGSP22914 178 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 ACKR3P25106 362 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 PTBP1P26599 531 aaKnown RBP eCLIP5.44□□□□□ -1.54
CLK1-210ENST00000473565 BTCP35070 178 aa5.44□□□□□ -1.54
CLK1-210ENST00000473565 EIF2S3P41091 472 aaKnown RBP5.44□□□□□ -1.54
CLK1-210ENST00000473565 CCR6P51684 374 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms