RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 TEX30Q5JUR7 227 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 GLYATL3Q5SZD4 288 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 PRAMEF6Q5VXH4 476 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 DRAM2Q6UX65 266 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 CD300LDQ6UXZ3 194 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 ADGRG5Q8IZF4 528 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 BPIFB2Q8N4F0 458 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 IQCF1Q8N6M8 205 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 CELF2-AS1Q8N7Q2 184 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 OR6K6Q8NGW6 343 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 TEX47Q8TBZ9 253 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 GIPC3Q8TF64 312 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 SPRYD4Q8WW59 207 aaPredicted RBP7.56□□□□□ -1.2
USF1-204ENST00000472217 C22orf15Q8WYQ4 148 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 DVL3Q92997 716 aaPredicted RBP7.56□□□□□ -1.2
USF1-204ENST00000472217 POP5Q969H6 163 aaKnown RBP7.56□□□□□ -1.2
USF1-204ENST00000472217 SLAMF6Q96DU3 332 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 LRGUKQ96M69 825 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 FEVQ99581 238 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 KCNJ15Q99712 375 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 TMEM246Q9BRR3 403 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 COPS4Q9BT78 406 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 SUCNR1Q9BXA5 334 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 C1orf21Q9H246 121 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 MED20Q9H944 212 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 CMC2Q9NRP2 79 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 CENPMQ9NSP4 180 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 LRCH1Q9Y2L9 728 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 INSIG2Q9Y5U4 225 aa7.56□□□□□ -1.2
USF1-204ENST00000472217 ARRDC5A6NEK1 342 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 GGT3PA6NGU5 568 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 FAM183AA6NL82 134 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 CD300LBA8K4G0 201 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ZNF878C9JN71 531 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 H3BN98 237 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ZNF593O00488 134 aaPredicted RBP7.55□□□□□ -1.2
USF1-204ENST00000472217 DYNC1I1O14576 645 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 FSTL3O95633 263 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 IFNGP01579 166 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 SLC2A1P11166 492 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 RPS2P15880 293 aaKnown RBP7.55□□□□□ -1.2
USF1-204ENST00000472217 ZNF3P17036 446 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 GRK5P34947 590 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 PRKXP51817 358 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 RAD23AP54725 363 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ACTG1P63261 375 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 PAX2Q02962 417 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 GK3PQ14409 553 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 TAF13Q15543 124 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 OR8G1Q15617 311 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ZNF404Q494X3 552 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ARMCX4Q5H9R4 360 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 KLF17Q5JT82 389 aaPredicted RBP7.55□□□□□ -1.2
USF1-204ENST00000472217 LINC01590Q5TEZ4 76 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 SPATC1Q76KD6 591 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 TMEM179BQ7Z7N9 219 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 KLBQ86Z14 1044 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 C1orf87Q8N0U7 546 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 C19orf18Q8NEA5 215 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 Q8TCH9 128 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 CANT1Q8WVQ1 401 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 JMJD8Q96S16 334 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 THTPAQ9BU02 230 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ADAT1Q9BUB4 502 aaKnown RBP7.55□□□□□ -1.2
USF1-204ENST00000472217 CHID1Q9BWS9 393 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 SSBP3Q9BWW4 388 aaPredicted RBP7.55□□□□□ -1.2
USF1-204ENST00000472217 SLC22A4Q9H015 551 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ESM1Q9NQ30 184 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 UFSP2Q9NUQ7 469 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 MIOXQ9UGB7 285 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 OR5V1Q9UGF6 321 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 PPIAL4AQ9Y536 164 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 AUP1Q9Y679 476 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 ARHGAP32A7KAX9 2087 aa7.55□□□□□ -1.2
USF1-204ENST00000472217 DHRS12A0PJE2 317 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 AQP12BA6NM10 295 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 GMDSO60547 372 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 PTBP3O95758 552 aaKnown RBP7.54□□□□□ -1.2
USF1-204ENST00000472217 IRF2P14316 349 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 CPT2P23786 658 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 FPR2P25090 351 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 CD80P33681 288 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 PITPNBP48739 271 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 BLVRAP53004 296 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 GNB2P62879 340 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 HOXA4Q00056 320 aaPredicted RBP7.54□□□□□ -1.2
USF1-204ENST00000472217 EIF2B1Q14232 305 aaKnown RBP7.54□□□□□ -1.2
USF1-204ENST00000472217 TUSC1Q2TAM9 212 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 LYPD2Q6UXB3 125 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 C12orf54Q6X4T0 127 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 TRPM8Q7Z2W7 1104 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 DPY19L4Q7Z388 723 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 AQP12AQ8IXF9 295 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 ZDHHC22Q8N966 263 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 OR8B3Q8NGG8 313 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 OR56B2PQ8NGI1 322 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 OR11L1Q8NGX0 322 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 OR6N2Q8NGY6 317 aa7.54□□□□□ -1.2
USF1-204ENST00000472217 FAM216AQ8WUB2 273 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms