RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 LRRC25Q8N386 305 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 OR52M1Q8NGK5 317 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 OR4A15Q8NGL6 344 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 SFXN5Q8TD22 340 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF675Q8TD23 568 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 GIPC3Q8TF64 312 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 UCN3Q969E3 161 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CIDECQ96AQ7 238 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF578Q96N58 590 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CTRCQ99895 268 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ECSITQ9BQ95 431 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 THTPAQ9BU02 230 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ULBP3Q9BZM4 244 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 GLIPR2Q9H4G4 154 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 NCOR1P1Q9H4R4 102 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 DCLRE1BQ9H816 532 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 WDR54Q9H977 334 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 TPT1P8Q9HAU6 139 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 IL1RL2Q9HB29 575 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 S100A14Q9HCY8 104 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 THUMPD1Q9NXG2 353 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 SLC25A37Q9NYZ2 338 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 ADA2Q9NZK5 511 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CNOT2Q9NZN8 540 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 VAPAQ9P0L0 249 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 PISDQ9UG56 409 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CD300AQ9UGN4 299 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 NXT1Q9UKK6 140 aaKnown RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 CAB39Q9Y376 341 aaPredicted RBP3.96□□□□□ -1.78
CCDC39-202ENST00000471307 L3MBTL1Q9Y468 752 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 AHCTF1Q8WYP5 2266 aa3.96□□□□□ -1.78
CCDC39-202ENST00000471307 PTPRBP23467 1997 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 IGKV3D-11A0A0A0MRZ8 115 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 ANKRD30BLA7E2S9 258 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 A8MUI8 341 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 C9J4A7 227 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 H0Y8G0 127 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 H0YC42 278 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 FXYD1O00168 92 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 LGALS8O00214 317 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 EMC8O43402 210 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 STK17BO94768 372 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 TNFSF15O95150 251 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 UMPSP11172 480 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 HSD17B1P14061 328 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 NQO1P15559 274 aaKnown RBP3.95□□□□□ -1.78
CCDC39-202ENST00000471307 ME2P23368 584 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 HTR1EP28566 365 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 CHI3L1P36222 383 aaPredicted RBP3.95□□□□□ -1.78
CCDC39-202ENST00000471307 CDKN2CP42773 168 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 ALDH3B1P43353 468 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 SLC7A2P52569 658 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 EMP2P54851 167 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 CLDN6P56747 220 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 BTG2P78543 158 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 MYBPC1Q00872 1141 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 BNIP2Q12982 314 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 IL24Q13007 206 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 FADDQ13158 208 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 SNTB2Q13425 540 aaKnown RBP3.95□□□□□ -1.78
CCDC39-202ENST00000471307 GK2Q14410 553 aaPredicted RBP3.95□□□□□ -1.78
CCDC39-202ENST00000471307 RGNQ15493 299 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 NSDHLQ15738 373 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 PIGGQ5H8A4 983 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 MLIPQ5VWP3 458 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 SAXO2Q658L1 398 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF600Q6ZNG1 722 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 COX15Q7KZN9 410 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 C6orf120Q7Z4R8 191 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 MSRB3Q8IXL7 192 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 PRR22Q8IZ63 422 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 CLECL1Q8IZS7 167 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 OR2L13Q8N349 312 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 KIF2BQ8N4N8 673 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 BCORP1Q8N888 145 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 FADS6Q8N9I5 356 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 SMYD1Q8NB12 490 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 MORN4Q8NDC4 146 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 OR56B2PQ8NGI1 322 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 ZFP90Q8TF47 636 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 POP5Q969H6 163 aaKnown RBP3.95□□□□□ -1.78
CCDC39-202ENST00000471307 NEURL3Q96EH8 262 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 SLC35A5Q9BS91 424 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 TRIM4Q9C037 500 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 KAT8Q9H7Z6 458 aaKnown RBP3.95□□□□□ -1.78
CCDC39-202ENST00000471307 WDR76Q9H967 626 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 CXorf21Q9HAI6 301 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 CMTM6Q9NX76 183 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 DHRS4-AS1Q9P1J3 65 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 BCAP29Q9UHQ4 241 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 ZNF639Q9UID6 485 aa3.95□□□□□ -1.78
CCDC39-202ENST00000471307 NUP210LQ5VU65 1888 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 PRORSD1PA6NEY8 169 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 IDSB3KWA1 339 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 C21orf140B9A014 251 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 UPK1AO00322 258 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 NME4O00746 187 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CASQ2O14958 399 aaPredicted RBP3.94□□□□□ -1.78
CCDC39-202ENST00000471307 ALOX12BO75342 701 aa3.94□□□□□ -1.78
CCDC39-202ENST00000471307 CIB2O75838 187 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms