RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 NMES1Q9C002 83 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 GAL3ST2Q9H3Q3 398 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CERS4Q9HA82 394 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 ADAP2Q9NPF8 381 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 CLDND1Q9NY35 253 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 IER3IP1Q9Y5U9 82 aa3.8□□□□□ -1.8
VPS50-210ENST00000471188 HEATR5BQ9P2D3 2071 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SCN8AQ9UQD0 1980 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 A0A0A6YYH2 397 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 LOC100289279A0A1B0GTE1 492 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 A6NJ64 397 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TAAR5O14804 337 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TBL1XO60907 577 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 GCGP01275 180 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TACSTD2P09758 323 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 NID1P14543 1247 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 EPHA1P21709 976 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TACR3P29371 465 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SERPINA4P29622 427 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CORO1AP31146 461 aaKnown RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC6A6P31641 620 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CEACAM8P31997 349 aaPredicted RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 HRH1P35367 487 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PPP1CCP36873 323 aaKnown RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 RPS27P42677 84 aaKnown RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC6A9P48067 706 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 NPY4RP50391 375 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TMEM33P57088 247 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TAS2R38P59533 333 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 RBX1P62877 108 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC35A1P78382 337 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 H3F3AP84243 136 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 GXYLT1Q4G148 440 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC22A6Q4U2R8 563 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 AADACL3Q5VUY0 350 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 LEMD1Q68G75 181 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR4C11Q6IEV9 310 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 NXPE4Q6UWF7 544 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TMEM182Q6ZP80 229 aaPredicted RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 RNF44Q7L0R7 432 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 MDGA2Q7Z553 956 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TRAPPC6BQ86SZ2 158 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 ZNF429Q86V71 674 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TMEM183AQ8IXX5 376 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 ZNF100Q8IYN0 542 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR2L13Q8N349 312 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR10A7Q8NGE5 316 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR1N1Q8NGS0 311 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC2A12Q8TD20 617 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 DOK4Q8TEW6 326 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 THAP3Q8WTV1 239 aaPredicted RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 UBE2E3Q969T4 207 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 GNRHR2Q96P88 292 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 AQP10Q96PS8 301 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR7D2Q96RA2 312 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 MENTQ9BUN1 341 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 ACTR3CQ9C0K3 210 aaPredicted RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 BCL2L10Q9HD36 194 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PDE7BQ9NP56 450 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PRSS16Q9NQE7 514 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SPHK2Q9NRA0 654 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CGGBP1Q9UFW8 167 aaPredicted RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC25A13Q9UJS0 675 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PLAGL1Q9UM63 463 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 RNF24Q9Y225 148 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 RCL1Q9Y2P8 373 aaKnown RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 MEMO1Q9Y316 297 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PLXNA3P51805 1871 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 MYO16Q9Y6X6 1858 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 BORCS7-ASMTA0A0B4J1R7 106 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 NPIPA5A0A0B4J1W7 369 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 A0A1W2PS29 197 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 NPIPA7E9PJI5 369 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 RPL36A-HNRNPH2H7BZ11 118 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 EFSO43281 561 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TMPRSS11DO60235 418 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CNMDO75829 334 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 NXPH2O95156 264 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CYB5R3P00387 301 aaPredicted RBP3.79□□□□□ -1.8
VPS50-210ENST00000471188 NPIPA8P0DM63 369 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 OR5H8P0DN80 308 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 HKR1P10072 659 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PAX1P15863 534 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PNLIPP16233 465 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 HLA-GP17693 338 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 FCARP24071 287 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 MC3RP41968 323 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 TNFSF10P50591 281 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 PDX1P52945 283 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CLDN6P56747 220 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 BTG2P78543 158 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC7A9P82251 487 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SGCGQ13326 291 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 GLYATL3Q5SZD4 288 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 ZNF880Q6PDB4 577 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 ULK3Q6PHR2 472 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC39A5Q6ZMH5 540 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SLC35D2Q76EJ3 337 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 SMIM15Q7Z3B0 74 aa3.79□□□□□ -1.8
VPS50-210ENST00000471188 CACUL1Q86Y37 369 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms