RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 TTRP02766 147 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 CD74P04233 296 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 HCKP08631 526 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 OR4E1P0C645 316 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 CD37P11049 281 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 FOSL1P15407 271 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 CSRP1P21291 193 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 CD34P28906 385 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 SSTR2P30874 369 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 S100A11P31949 105 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 FOLR3P41439 243 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 CSNK1A1P48729 337 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 CX3CR1P49238 355 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 CLDN6P56747 220 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 SEC61A1P61619 476 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 LSM6P62312 80 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 GK2Q14410 553 aaPredicted RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 KCNMB1Q16558 191 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 ZNF239Q16600 458 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 TMEM176BQ3YBM2 270 aaPredicted RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 CDNFQ49AH0 187 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 SCGB2B2Q4G0G5 96 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 CARD17Q5XLA6 110 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 B3GNTL1Q67FW5 361 aaPredicted RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 CORO6Q6QEF8 472 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 ZNF574Q6ZN55 896 aaPredicted RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 SLC36A1Q7Z2H8 476 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 MDGA2Q7Z553 956 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 TMED4Q7Z7H5 227 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 NAXDQ8IW45 347 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 GTPBP8Q8N3Z3 284 aaPredicted RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 TMEM156Q8N614 296 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 FADS6Q8N9I5 356 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 ACBD4Q8NC06 268 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 KCNG3Q8TAE7 436 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 LRRC20Q8TCA0 184 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 C17orf50Q8WW18 174 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 RELTQ969Z4 430 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 SEH1LQ96EE3 360 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 PGAM5Q96HS1 289 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 S100A13Q99584 98 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 PHB2Q99623 299 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 GAL3ST1Q99999 423 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 WDR77Q9BQA1 342 aaPredicted RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 EMC6Q9BV81 110 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 MRPL13Q9BYD1 178 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 CST11Q9H112 138 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 HPF1Q9NWY4 346 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 SLC2A8Q9NY64 477 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 GHRLQ9UBU3 117 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 KCNN3Q9UGI6 736 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 PILRBQ9UKJ0 227 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 FARSAQ9Y285 508 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 MRPS28Q9Y2Q9 187 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 NOP16Q9Y3C1 178 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 PTRH2Q9Y3E5 179 aaKnown RBP7.09□□□□□ -1.27
SMC4-212ENST00000470240 RP1P56715 2156 aa7.09□□□□□ -1.27
SMC4-212ENST00000470240 FER1L5A0AVI2 2057 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 RALGAPA1Q6GYQ0 2036 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 GON4LQ3T8J9 2241 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 A0A0D9SG52 128 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 PLSCR5A0PG75 271 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 TMEM235A6NFC5 223 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 D6RAR5 112 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 ADAM10O14672 748 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 ARPC5O15511 151 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 TRAF3IP2O43734 574 aaPredicted RBP7.08□□□□□ -1.28
SMC4-212ENST00000470240 MTRF1O75570 445 aaKnown RBP7.08□□□□□ -1.28
SMC4-212ENST00000470240 QDPRP09417 244 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 VSIG10L2P0DP72 767 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 ICAM2P13598 275 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 ZNF17P17021 662 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 SPINK2P20155 84 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 MSR1P21757 451 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 MPZP25189 248 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 SFTPDP35247 375 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 PTGDSP41222 190 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 P2RX3P56373 397 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 DSCR4P56555 118 aaPredicted RBP7.08□□□□□ -1.28
SMC4-212ENST00000470240 PLA2G7Q13093 441 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 PCOLCEQ15113 449 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 SGCAQ16586 387 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 PNLIPRP3Q17RR3 467 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 PRAMEF20Q5VT98 475 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 RAET1LQ5VY80 246 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 OTPQ5XKR4 325 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 FAHD2BQ6P2I3 314 aaPredicted RBP7.08□□□□□ -1.28
SMC4-212ENST00000470240 SLC25A47Q6Q0C1 308 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 SEZ6L2Q6UXD5 910 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 ZNF813Q6ZN06 617 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 TMPPEQ6ZT21 453 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 RFPL4BQ6ZWI9 263 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 TMPRSS9Q7Z410 1059 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 FJX1Q86VR8 437 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 TMEM17Q86X19 198 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 DTX1Q86Y01 620 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 BEST3Q8N1M1 668 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 SLC38A9Q8NBW4 561 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 GJC3Q8NFK1 279 aa7.08□□□□□ -1.28
SMC4-212ENST00000470240 STEAP2Q8NFT2 490 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms