RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 GMDSO60547 372 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 SPAG7O75391 227 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 RP2O75695 350 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 OR8U9P0C7N5 309 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 HOXB8P17481 243 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-209ENST00000467124 PGAM1P18669 254 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 DTYMKP23919 212 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 PPICP45877 212 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 AP1S2P56377 157 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 RPL23P62829 140 aaKnown RBP2.65□□□□□ -1.99
VPS13A-209ENST00000467124 ARG2P78540 354 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 SLAQ13239 276 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 STK11Q15831 433 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 WDR82Q6UXN9 313 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 PGAM4Q8N0Y7 254 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 CSGALNACT2Q8N6G5 542 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 NOXO1Q8NFA2 376 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 OR8U1Q8NH10 309 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 ASZ1Q8WWH4 475 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 OR8D1Q8WZ84 308 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 FAM131CQ96AQ9 280 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 GABRG3Q99928 467 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 HINT2Q9BX68 163 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 SLC25A39Q9BZJ4 359 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-209ENST00000467124 TM6SF2Q9BZW4 377 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 LINC00597Q9H2U6 94 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 XKR8Q9H6D3 395 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 REEP1Q9H902 201 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 MED4Q9NPJ6 270 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 RRAGDQ9NQL2 400 aaPredicted RBP2.65□□□□□ -1.99
VPS13A-209ENST00000467124 OR12D3Q9UGF7 316 aa2.65□□□□□ -1.99
VPS13A-209ENST00000467124 COL22A1Q8NFW1 1626 aaPredicted RBP2.64□□□□□ -1.99
VPS13A-209ENST00000467124 GPATCH8Q9UKJ3 1502 aaKnown RBP2.64□□□□□ -1.99
VPS13A-209ENST00000467124 TRAV19A0A0A6YYK7 116 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 A6NDN8 102 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 SERPINB7O75635 380 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 SNAI1O95863 264 aaPredicted RBP2.64□□□□□ -1.99
VPS13A-209ENST00000467124 CD9P21926 228 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 PFN2P35080 140 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 TALDO1P37837 337 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 MYCNOSP40205 109 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 PPOXP50336 477 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 UBE2E1P51965 193 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 CLDN6P56747 220 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 MECOMQ03112 1051 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 SYCNQ0VAF6 134 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 STK38Q15208 465 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 FAM78AQ5JUQ0 283 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 RWDD4Q6NW29 188 aaKnown RBP2.64□□□□□ -1.99
VPS13A-209ENST00000467124 OR2W3Q7Z3T1 314 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 SNX20Q7Z614 316 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 WDFY1Q8IWB7 410 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 SLC30A8Q8IWU4 369 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 OR10G2Q8NGC3 310 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 OR13C9Q8NGT0 318 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 OR52P1PQ8NH57 321 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 SYNPRQ8TBG9 265 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 RXFP2Q8WXD0 754 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 GHSRQ92847 366 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 DCPSQ96C86 337 aaKnown RBP2.64□□□□□ -1.99
VPS13A-209ENST00000467124 SEH1LQ96EE3 360 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 UBE2E2Q96LR5 201 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF488Q96MN9 340 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 ZNF285Q96NJ3 590 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 HSD17B10Q99714 261 aaKnown RBP2.64□□□□□ -1.99
VPS13A-209ENST00000467124 UTP23Q9BRU9 249 aaKnown RBP2.64□□□□□ -1.99
VPS13A-209ENST00000467124 AGMATQ9BSE5 352 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 TMEM243Q9BU79 118 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 ARMC7Q9H6L4 198 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 KIR3DX1Q9H7L2 352 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 ANKHQ9HCJ1 492 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 TMEM100Q9NV29 134 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 TBX21Q9UL17 535 aa2.64□□□□□ -1.99
VPS13A-209ENST00000467124 IGHV5-10-1A0A0J9YXX1 117 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 A0A0J9YYE9 177 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 TVP23AA6NH52 213 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 K7EN84 100 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 RFXANKO14593 260 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 ENSAO43768 121 aaKnown RBP2.63□□□□□ -1.99
VPS13A-209ENST00000467124 PLEKHA8P1O95397 391 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 GCGP01275 180 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 TRBC1P01850 177 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 CTSLP07711 333 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 THRAP10827 490 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 HTR2CP28335 458 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 CSKP41240 450 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 CDK5Q00535 292 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 SIGLEC14Q08ET2 396 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 IFFO1Q0D2I5 559 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 KIR2DS1Q14954 304 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 IRF4Q15306 451 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 TCEAL5Q5H9L2 206 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 CD300LGQ6UXG3 332 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 Q6ZR03 302 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 SLC35D2Q76EJ3 337 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 CALHM1Q8IU99 346 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 ENTHD1Q8IYW4 607 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 FAM58AQ8N1B3 248 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 C15orf56Q8N910 161 aa2.63□□□□□ -1.99
VPS13A-209ENST00000467124 OR4D6Q8NGJ1 314 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms