RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ACTRT1Q8TDG2 376 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 LRRC29Q8WV35 223 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ASZ1Q8WWH4 475 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 BAALCQ8WXS3 180 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CACNG8Q8WXS5 425 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 TFGQ92734 400 aaPredicted RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 NRBF2Q96F24 287 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 DYNLL2Q96FJ2 89 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RNF170Q96K19 258 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 LINC00477Q96M19 166 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 HINT2Q9BX68 163 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 KIR3DX1Q9H7L2 352 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 TMEM9BQ9NQ34 198 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF226Q9NYT6 803 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC25A37Q9NYZ2 338 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 ADA2Q9NZK5 511 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CHMP5Q9NZZ3 219 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 DEC1Q9P2X7 70 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 MARCOQ9UEW3 520 aaPredicted RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 TRMT112Q9UI30 125 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 RBMX2Q9Y388 322 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 F11RQ9Y624 299 aaKnown RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 NFASCO94856 1347 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 MROH7Q68CQ1 1323 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CENPJQ9HC77 1338 aaPredicted RBP1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 CEMIPQ8WUJ3 1361 aa1.32□□□□□ -2.2
GTF3C3-209ENST00000466862 IGLV1-36A0A0B4J1U3 117 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 RAB19A4D1S5 217 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 COLCA2A8K830 154 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SYCE1LA8MT33 242 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 PDZK1P1A8MUH7 402 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 HACD1B0YJ81 288 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 HSBP1L1C9JCN9 74 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ANKRD65E5RJM6 399 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 H7C1H1 209 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 LAD1O00515 517 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 RFXANKO14593 260 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 BET1O15155 118 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ERI3O43414 337 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CDC40O60508 579 aaKnown RBP eCLIP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 GMDSO60547 372 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ENTPD5O75356 428 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SUPT3HO75486 399 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 RBBP9O75884 186 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 GCGP01275 180 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 MRPL3P09001 348 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 GNAO1P09471 354 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 OR8U9P0C7N5 309 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 PGA5P0DJD9 388 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CD37P11049 281 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ERGP11308 486 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CCL2P13500 99 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 PSMC3P17980 439 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 GABRG2P18507 467 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 RAB5AP20339 215 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 USF1P22415 310 aaPredicted RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 WARSP23381 471 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 IL32P24001 234 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 HOXA9P31269 272 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 DEKP35659 375 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CSNK1A1P48729 337 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CYB561P49447 251 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF138P52744 262 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CRISP3P54108 245 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 VSX2P58304 361 aaPredicted RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF121P58317 390 aaPredicted RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 PPP1CBP62140 327 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 PRR3P79522 188 aaKnown RBP1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SEMG2Q02383 582 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SIGLEC14Q08ET2 396 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 GPR176Q14439 515 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 VAMP3Q15836 100 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 KRTAP6-3Q3LI67 103 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 PIGGQ5H8A4 983 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CD300LGQ6UXG3 332 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 WDR82Q6UXN9 313 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 NPSR1Q6W5P4 371 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF493Q6ZR52 646 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF621Q6ZSS3 439 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 LINC00336Q6ZUF6 198 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ABHD13Q7L211 337 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SNX20Q7Z614 316 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 LRP11Q86VZ4 500 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 IQCF2Q8IXL9 164 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SYCE1Q8N0S2 351 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 STPG2Q8N412 459 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF709Q8N972 641 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 WDR31Q8NA23 367 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 NOXO1Q8NFA2 376 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 OR10G2Q8NGC3 310 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 OR5AR1Q8NGP9 310 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 OR6Q1Q8NGQ2 317 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 OR6K6Q8NGW6 343 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 OR8U1Q8NH10 309 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 TMEM158Q8WZ71 300 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 OR8D1Q8WZ84 308 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 NTAN1Q96AB6 310 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 CREB3L1Q96BA8 519 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 LRRC58Q96CX6 371 aa1.31□□□□□ -2.2
GTF3C3-209ENST00000466862 SEH1LQ96EE3 360 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms