RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 LAMP5Q9UJQ1 280 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 COPS3Q9UNS2 423 aa8.04□□□□□ -1.12
SDCCAG3-208ENST00000466579 TLN2Q9Y4G6 2542 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 IGHV4-61A0A0C4DH41 118 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 IGHV1-69-2A0A0G2JMI3 117 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 LYNX1G3V0Z9 82 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 J3QRE1 110 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 PHYHO14832 338 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 CASQ2O14958 399 aaPredicted RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 SMAD7O15105 426 aaKnown RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 MLNRO43193 412 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 SPRY3O43610 288 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF254O75437 659 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 PTBP3O95758 552 aaKnown RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 BAG2O95816 211 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 H2BFMP0C1H6 154 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 SBK2P0C263 348 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 LYNX1P0DP58 116 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ANPEPP15144 967 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 HSD11B1P28845 292 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 SLC6A9P48067 706 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 HCCSP53701 268 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF121P58317 390 aaPredicted RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 PSMA6P60900 246 aaKnown RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 POU4F2Q12837 409 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 RCN1Q15293 331 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 TSTQ16762 297 aaKnown RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 TMEM249Q2WGJ8 235 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZIK1Q3SY52 487 aaPredicted RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 SPRNQ5BIV9 151 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF684Q5T5D7 378 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 MEDAGQ5VYS4 303 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 KCTD18Q6PI47 426 aaPredicted RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 CLEC9AQ6UXN8 241 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 PGAP1Q75T13 922 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 SPATC1Q76KD6 591 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF679Q8IYX0 411 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 PACRGLQ8N7B6 248 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF283Q8N7M2 679 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 MAPK1IP1LQ8NDC0 245 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 OR13G1Q8NGZ3 307 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 FAM81AQ8TBF8 368 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 THEM6Q8WUY1 208 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 HPS1Q92902 700 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 UBE2FQ969M7 185 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ELMOD3Q96FG2 381 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 OR8B4Q96RC9 309 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 EGLN1Q9GZT9 426 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 RGCCQ9H4X1 137 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 SAP30LQ9HAJ7 183 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF275Q9NSD4 429 aaPredicted RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 DECR2Q9NUI1 292 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 CLN6Q9NWW5 311 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 MRPL15Q9P015 296 aaKnown RBP8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZNF319Q9P2F9 582 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 IL19Q9UHD0 177 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 LRP12Q9Y561 859 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 ZFHX3Q15911 3703 aa8.03□□□□□ -1.12
SDCCAG3-208ENST00000466579 DYSFO75923 2080 aa8.02□□□□□ -1.12
SDCCAG3-208ENST00000466579 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.02□□□□□ -1.133e-6■■■□□ 16
SDCCAG3-208ENST00000466579 LOC100130705A0A1B0GUX0 176 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 hCG_38984A0A1B0GV85 526 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 CD300LBA8K4G0 201 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 ANKRD65E5RJM6 399 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 CD5LO43866 347 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 SRSF10O75494 262 aaKnown RBP8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 IGLV3-1P01715 115 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 MRPL3P09001 348 aaKnown RBP8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 OR2T7P0C7T2 308 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 SLC2A1P11166 492 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 TNFSF4P23510 183 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 CFL1P23528 166 aaKnown RBP8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 DDOSTP39656 456 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 GATA4P43694 442 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 MMP16P51512 607 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 TNFAIP6P98066 277 aaPredicted RBP8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 EGR3Q06889 387 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 LRRN1Q6UXK5 716 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 USP51Q70EK9 711 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 MRPL21Q7Z2W9 205 aaKnown RBP8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 SLC35F2Q8IXU6 374 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 CELF2-AS1Q8N7Q2 184 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 OR2Z1Q8NG97 314 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 OR2T27Q8NH04 317 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 OR2AE1Q8NHA4 323 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 RHOXF1Q8NHV9 184 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 RFKQ969G6 155 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 SGK3Q96BR1 496 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 MROQ9BYG7 248 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 SLC22A4Q9H015 551 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 OR10A2Q9H208 303 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 TMEM100Q9NV29 134 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 FAM118AQ9NWS6 357 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 FAM206AQ9NX38 181 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 IMPAD1Q9NX62 359 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 SMPD3Q9NY59 655 aaPredicted RBP8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 DNAJC27Q9NZQ0 273 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZNF391Q9UJN7 358 aa8.02□□□□□ -1.13
SDCCAG3-208ENST00000466579 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms