RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 TMPRSS11FQ6ZWK6 438 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 THAP5Q7Z6K1 395 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 UEVLDQ8IX04 471 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 OR52L1Q8NGH7 329 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 OR6N1Q8NGY5 312 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 PFN4Q8NHR9 129 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 ZNF417Q8TAU3 575 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 SGTBQ96EQ0 304 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 SIGLEC11Q96RL6 698 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 ZNF587Q96SQ5 575 aaPredicted RBP12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 NUDT16L1Q9BRJ7 211 aaKnown RBP12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 ACOXLQ9NUZ1 547 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 IMPAD1Q9NX62 359 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 NDRG4Q9ULP0 352 aaKnown RBP12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 CDH10Q9Y6N8 788 aa12.23□□□□□ -0.45
HMGXB4-206ENST00000466438 ZAR1LA6NP61 321 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 MPZL2O60487 215 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 SOX14O95416 240 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 RPSAP08865 295 aaKnown RBP12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 RPS2P15880 293 aaKnown RBP12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 POU1F1P28069 291 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 GGT2P36268 569 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 MPV17P39210 176 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 IL5RAQ01344 420 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 EGR4Q05215 589 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 PTGES3Q15185 160 aaKnown RBP12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 TMEM53Q6P2H8 277 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 H1FNTQ75WM6 255 aaPredicted RBP12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 KLBQ86Z14 1044 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 OR4S1Q8NGB4 309 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 FAM81AQ8TBF8 368 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 FANK1Q8TC84 345 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 GATAD2BQ8WXI9 593 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 PLEKHA8Q96JA3 519 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 DPAGT1Q9H3H5 408 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 TMEM165Q9HC07 324 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 TBC1D23Q9NUY8 699 aa12.22□□□□□ -0.45
HMGXB4-206ENST00000466438 MAGEA13PA6NCF6 341 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 C3orf84H3BNL1 204 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 OR2T1O43869 369 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 CLIC3O95833 236 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 GNAO1P09471 354 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 HLA-DOBP13765 273 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 ANKDD1AQ495B1 522 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 NRN1LQ496H8 165 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 DEFB121Q5J5C9 76 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 SPATA46Q5T0L3 261 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 THEM4Q5T1C6 240 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 MBNL2Q5VZF2 373 aaKnown RBP12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 DPPA2Q7Z7J5 298 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 CFHR4Q92496 578 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 SAMD8Q96LT4 415 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 PCGF1Q9BSM1 259 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 RNF121Q9H920 327 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 SLC25A19Q9HC21 320 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 MEPEQ9NQ76 525 aaPredicted RBP12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 BLOC1S6Q9UL45 172 aa12.21□□□□□ -0.45
HMGXB4-206ENST00000466438 TRAV36DV7A0A075B6V5 113 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 IQCMA0A1B0GVH7 501 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 E9PQ18 207 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 P2RY10O00398 339 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 OR7A10O76100 309 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 MT-ATP6P00846 226 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 TNFRSF1AP19438 455 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 GRPRP30550 384 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 POLR2IP36954 125 aaKnown RBP12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 TOP3AQ13472 1001 aaPredicted RBP12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 FAM69AQ5T7M9 428 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 SLX4IPQ5VYV7 408 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 SLC27A4Q6P1M0 643 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 SMARCD3Q6STE5 483 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 OAFQ86UD1 273 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 C10orf53Q8N6V4 93 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 KLF14Q8TD94 323 aaPredicted RBP12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 ITPKCQ96DU7 683 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 NEIL1Q96FI4 390 aaPredicted RBP12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 SH3GL3Q99963 347 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 B9D2Q9BPU9 175 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 YTHDF1Q9BYJ9 559 aaKnown RBP12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 MSL2Q9HCI7 577 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 C20orf141Q9NUB4 165 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 IL20Q9NYY1 176 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 FBLN5Q9UBX5 448 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 MIOXQ9UGB7 285 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 BAIAP2Q9UQB8 552 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 MYRFQ9Y2G1 1151 aa12.2□□□□□ -0.46
HMGXB4-206ENST00000466438 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 IGKV1D-42A0A075B6H8 117 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 CENPVL3A0A0U1RRI6 287 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 ZNF726A6NNF4 738 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 MS4A18H0YCH9 400 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 CDC42EP2O14613 210 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 FARS2O95363 451 aaKnown RBP12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 HIST1H2ABP04908 130 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 TNFSF4P23510 183 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 SLC6A6P31641 620 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 APLNRP35414 380 aa12.19□□□□□ -0.46
HMGXB4-206ENST00000466438 TGFBR2P37173 567 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms