RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ABOP16442 354 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 MPZP25189 248 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 CD96P40200 585 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 RPS27AP62979 156 aaKnown RBP16.24■□□□□ 0.19
SYNE4-204ENST00000465425 UBA52P62987 128 aaKnown RBP16.24■□□□□ 0.19
SYNE4-204ENST00000465425 PPP1R1AQ13522 171 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 TMEM81Q6P7N7 255 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 OR4K17Q8NGC6 315 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 SPSB2Q99619 263 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DEFB126Q9BYW3 111 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 CST11Q9H112 138 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 RALGAPA1Q6GYQ0 2036 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 A0A1B0GW55 424 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 KANTRA0A1W2PQU2 76 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 ZNF726A6NNF4 738 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 FAM25EA8MYX2 175 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DUX4L2P0CJ85 424 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DUX4L3P0CJ86 424 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DUX4L4P0CJ87 422 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DUX4L5P0CJ88 424 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DUX4L6P0CJ89 424 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DUX4L7P0CJ90 424 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 VAMP1P23763 118 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 ZBTB25P24278 435 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 MFAP5Q13361 173 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 C11orf87Q6NUJ2 197 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 ZNF529Q6P280 563 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 RHOUQ7L0Q8 258 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 PPP1R3BQ86XI6 285 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 OR6X1Q8NH79 312 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 OR1S1Q8NH92 325 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 SEC22AQ96IW7 307 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 NUDT16L1Q9BRJ7 211 aaKnown RBP16.24■□□□□ 0.19
SYNE4-204ENST00000465425 DUX4Q9UBX2 424 aa16.24■□□□□ 0.19
SYNE4-204ENST00000465425 WDR87Q6ZQQ6 2873 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 A0A1W2PQM1 296 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 TMEM14DPA8MWL7 114 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 TBPP20226 339 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 P2RY4P51582 365 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 ZNF121P58317 390 aaPredicted RBP16.23■□□□□ 0.19
SYNE4-204ENST00000465425 CCL7P80098 99 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 FOXK1P85037 733 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 GFOD2Q3B7J2 385 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 GLIPR1L1Q6UWM5 242 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 PGAP1Q75T13 922 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 GLRX5Q86SX6 157 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 OR2M3Q8NG83 312 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 OR8B12Q8NGG6 310 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 SPACA9Q96E40 222 aaPredicted RBP16.23■□□□□ 0.19
SYNE4-204ENST00000465425 TMEM41AQ96HV5 264 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 OXGR1Q96P68 337 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 MRPS28Q9Y2Q9 187 aaKnown RBP16.23■□□□□ 0.19
SYNE4-204ENST00000465425 IGHV5-10-1A0A0J9YXX1 117 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 LOC105371267A0A1B0GV96 52 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 C9orf170A2RU37 121 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 TEX46H3BTG2 121 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 RER1O15258 196 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 OR2F2O95006 317 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 CHRM2P08172 466 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 HCKP08631 526 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 CXCL12P48061 93 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 OR2F1Q13607 317 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 TMEM176BQ3YBM2 270 aaPredicted RBP16.23■□□□□ 0.19
SYNE4-204ENST00000465425 CASTOR1Q8WTX7 329 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 SLC25A43Q8WUT9 341 aaPredicted RBP16.23■□□□□ 0.19
SYNE4-204ENST00000465425 MITD1Q8WV92 249 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 PPP1R1CQ8WVI7 109 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 ST8SIA2Q92186 375 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 ST8SIA4Q92187 359 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 FAM71F1Q96KD3 344 aaPredicted RBP16.23■□□□□ 0.19
SYNE4-204ENST00000465425 RASL10BQ96S79 203 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 NICN1Q9BSH3 213 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 GPR84Q9NQS5 396 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 WNT16Q9UBV4 365 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 FBLN5Q9UBX5 448 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 KCNK7Q9Y2U2 307 aa16.23■□□□□ 0.19
SYNE4-204ENST00000465425 A8MXK9 166 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 MPIG6BO95866 241 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 QDPRP09417 244 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 AKR1C4P17516 323 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 CASRP41180 1078 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 SRSF4Q08170 494 aaKnown RBP16.22■□□□□ 0.19
SYNE4-204ENST00000465425 ZNF345Q14585 488 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 TUSC1Q2TAM9 212 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 FAHD2BQ6P2I3 314 aaPredicted RBP16.22■□□□□ 0.19
SYNE4-204ENST00000465425 SLC25A47Q6Q0C1 308 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 MRGPRFQ96AM1 343 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 FAHD2AQ96GK7 314 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 SLC25A32Q9H2D1 315 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 TNFSF18Q9UNG2 199 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 ZNF814B7Z6K7 855 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 PMP2P02689 132 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 SLC25A4P12235 298 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 EPHA8P29322 1005 aaPredicted RBP16.22■□□□□ 0.19
SYNE4-204ENST00000465425 EIF1P41567 113 aaKnown RBP16.22■□□□□ 0.19
SYNE4-204ENST00000465425 CX3CR1P49238 355 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 ZNF385CQ66K41 422 aaPredicted RBP16.22■□□□□ 0.19
SYNE4-204ENST00000465425 OVCH2Q7RTZ1 564 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 OR2W3Q7Z3T1 314 aa16.22■□□□□ 0.19
SYNE4-204ENST00000465425 KCNRGQ8N5I3 272 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms