RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZNF878C9JN71 531 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 PPIAL4DF5H284 164 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 GNGT2O14610 69 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 PPIAL4FP0DN26 164 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 EPHA1P21709 976 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 GATA4P43694 442 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 PRKXP51817 358 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 SEC61A1P61619 476 aaKnown RBP15.89■□□□□ 0.13
COL5A1-203ENST00000460264 ZNF181Q2M3W8 571 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 GLYATL3Q5SZD4 288 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 SPATA24Q86W54 205 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 SPRYD4Q8WW59 207 aaPredicted RBP15.89■□□□□ 0.13
COL5A1-203ENST00000460264 KCNJ15Q99712 375 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 CENPMQ9NSP4 180 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 OPN4Q9UHM6 478 aa15.89■□□□□ 0.13
COL5A1-203ENST00000460264 A0A0A6YYJ9 748 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 CD300LBA8K4G0 201 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 CEACAM18A8MTB9 384 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 A8MXK9 166 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 E2F6O75461 281 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 CYB5R3P00387 301 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-203ENST00000460264 ADRA2CP18825 462 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 MAB21L1Q13394 359 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 TAF13Q15543 124 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 HS3ST5Q8IZT8 346 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 CELF2-AS1Q8N7Q2 184 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 SEMA6DQ8NFY4 1073 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 INTS14Q96SY0 518 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 C7orf69Q9H7B7 122 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 MMP26Q9NRE1 261 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 POMPQ9Y244 141 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 POLR3KQ9Y2Y1 108 aaPredicted RBP15.88■□□□□ 0.13
COL5A1-203ENST00000460264 DOCK11Q5JSL3 2073 aa15.88■□□□□ 0.13
COL5A1-203ENST00000460264 TCRBV3S1A0A5B6 114 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 LRRC30A6NM36 301 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 FKBP6O75344 327 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 DNAJC8O75937 253 aaPredicted RBP15.87■□□□□ 0.13
COL5A1-203ENST00000460264 ZNF205O95201 554 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 VENTXO95231 258 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 FSHBP01225 129 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 SLC2A1P11166 492 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 CA6P23280 308 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 POU1F1P28069 291 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 PMELP40967 661 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 CD200P41217 278 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 CBX1P83916 185 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 EIF2B1Q14232 305 aaKnown RBP15.87■□□□□ 0.13
COL5A1-203ENST00000460264 SPATC1Q76KD6 591 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 ERI1Q8IV48 349 aaKnown RBP15.87■□□□□ 0.13
COL5A1-203ENST00000460264 DEFB108BQ8NET1 73 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 OR6N2Q8NGY6 317 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 OTULINQ96BN8 352 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 ADAT1Q9BUB4 502 aaKnown RBP15.87■□□□□ 0.13
COL5A1-203ENST00000460264 MARCH7Q9H992 704 aa15.87■□□□□ 0.13
COL5A1-203ENST00000460264 GGT3PA6NGU5 568 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 TRAPPC2LH3BP13 241 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 GLCEO94923 617 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 FSTL3O95633 263 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 PAICSP22234 425 aaKnown RBP15.86■□□□□ 0.13
COL5A1-203ENST00000460264 GSTT1P30711 240 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 SLC15A1P46059 708 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 RAD23AP54725 363 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 GRB2P62993 217 aaKnown RBP15.86■□□□□ 0.13
COL5A1-203ENST00000460264 GINS1Q14691 196 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 OR8G1Q15617 311 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 ESCO2Q56NI9 601 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 DPY19L4Q7Z388 723 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 C1orf87Q8N0U7 546 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 PAPD5Q8NDF8 572 aaKnown RBP15.86■□□□□ 0.13
COL5A1-203ENST00000460264 NANPQ8TBE9 248 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 Q8TCH9 128 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 ABHD6Q9BV23 337 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 SLC22A4Q9H015 551 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 OPA3Q9H6K4 179 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 YY1AP1Q9H869 796 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 ZNF556Q9HAH1 456 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 TMEM165Q9HC07 324 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 DNAJB9Q9UBS3 223 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 LRCH1Q9Y2L9 728 aa15.86■□□□□ 0.13
COL5A1-203ENST00000460264 NOP16Q9Y3C1 178 aaKnown RBP15.86■□□□□ 0.13
COL5A1-203ENST00000460264 FAM20BO75063 409 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 RGS9O75916 674 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-203ENST00000460264 WNT2P09544 360 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 OSMP13725 252 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 RPS2P15880 293 aaKnown RBP15.85■□□□□ 0.13
COL5A1-203ENST00000460264 PRKACGP22612 351 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 CX3CR1P49238 355 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 MPPED2Q15777 294 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 ZNF404Q494X3 552 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 FAM201AQ5SY85 155 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 PRAMEF6Q5VXH4 476 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 PLBD1Q6P4A8 553 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 TIGD4Q8IY51 512 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 ZNF418Q8TF45 676 aaPredicted RBP15.85■□□□□ 0.13
COL5A1-203ENST00000460264 RNF133Q8WVZ7 376 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 ERGIC1Q969X5 290 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 SPSB4Q96A44 273 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 AMELYQ99218 206 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 TMEM246Q9BRR3 403 aa15.85■□□□□ 0.13
COL5A1-203ENST00000460264 OR51V1Q9H2C8 321 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms