RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 LGALS8O00214 317 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 TNFRSF13BO14836 293 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-220ENST00000458038 HLA-DQA2P01906 255 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 HIST1H1CP16403 213 aaKnown RBP17.89■□□□□ 0.45
CPNE1-220ENST00000458038 OMGP23515 440 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 IFNGR2P38484 337 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 NUDT2P50583 147 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 MZT1Q08AG7 82 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 LINC00346Q8IVM7 164 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 OR52J3Q8NH60 311 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 SSMEM1Q8WWF3 244 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 WFDC12Q8WWY7 111 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 TECTBQ96PL2 329 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 PCGF1Q9BSM1 259 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 IFT27Q9BW83 186 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 MMADHCQ9H3L0 296 aaPredicted RBP17.89■□□□□ 0.45
CPNE1-220ENST00000458038 UFSP2Q9NUQ7 469 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 TMCC3Q9ULS5 477 aa17.89■□□□□ 0.45
CPNE1-220ENST00000458038 TRAV38-1A0A0B4J264 116 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 CD300LBA8K4G0 201 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 M0R135 149 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 SASH3O75995 380 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 TOX4O94842 621 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 GADD45GO95257 159 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 GGT2P36268 569 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 CFHR2P36980 270 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 PDCD1Q15116 288 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 MPPED2Q15777 294 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 OLFML2AQ68BL7 652 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 FIP1L1Q6UN15 594 aaKnown RBP17.88■□□□□ 0.45
CPNE1-220ENST00000458038 ZNF620Q6ZNG0 422 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 OR4K13Q8NH42 304 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 TBC1D15Q8TC07 691 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 GATAD2BQ8WXI9 593 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 CMTM5Q96DZ9 223 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 ZNF799Q96GE5 643 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 TRIM15Q9C019 465 aa17.88■□□□□ 0.45
CPNE1-220ENST00000458038 PNRC2Q9NPJ4 139 aaKnown RBP17.88■□□□□ 0.45
CPNE1-220ENST00000458038 ZNF823P16415 610 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 CA6P23280 308 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 PSME3P61289 254 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 MIDNQ504T8 468 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 PRAMEF6Q5VXH4 476 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 NAA40Q86UY6 237 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 KIR3DL3Q8N743 410 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 TAF15Q92804 592 aaKnown RBP eCLIP17.87■□□□□ 0.451e-6■□□□□ 9.7
CPNE1-220ENST00000458038 WDFY2Q96P53 400 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 GORASP2Q9H8Y8 452 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 SPAG4Q9NPE6 437 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 C1RLQ9NZP8 487 aa17.87■□□□□ 0.45
CPNE1-220ENST00000458038 MRPL15Q9P015 296 aaKnown RBP17.87■□□□□ 0.45
CPNE1-220ENST00000458038 CLPSL1A2RUU4 121 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 OR6C68A6NDL8 312 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 TIMM23O14925 209 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 DIRAS1O95057 198 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 ECDO95905 644 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-220ENST00000458038 MELTFP08582 738 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 MMP9P14780 707 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 METTL11BQ5VVY1 283 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 DRAM2Q6UX65 266 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 OR4C15Q8NGM1 316 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 DYRK2Q92630 601 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 CITED1Q99966 193 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 ADAT1Q9BUB4 502 aaKnown RBP17.86■□□□□ 0.45
CPNE1-220ENST00000458038 CHIAQ9BZP6 476 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 OPA3Q9H6K4 179 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 MARCH7Q9H992 704 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 ACOXLQ9NUZ1 547 aa17.86■□□□□ 0.45
CPNE1-220ENST00000458038 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-220ENST00000458038 CENPVL3A0A0U1RRI6 287 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 GGT3PA6NGU5 568 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 M0QZ24 198 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 ADAM20O43506 726 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 OTX1P32242 354 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-220ENST00000458038 PRSS12P56730 875 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 OR8B8Q15620 311 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 C19orf18Q8NEA5 215 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 PYURFQ96I23 114 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 MAP6Q96JE9 813 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 C14orf119Q9NWQ9 140 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 CTSZQ9UBR2 303 aa17.85■□□□□ 0.45
CPNE1-220ENST00000458038 OOEPA6NGQ2 149 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 OR10H3O60404 316 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 SFTPBP07988 381 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 GSSP48637 474 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 SPIBQ01892 262 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 ZNF92Q03936 586 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 SFRP4Q6FHJ7 346 aaPredicted RBP17.84■□□□□ 0.45
CPNE1-220ENST00000458038 RPL13AP3Q6NVV1 102 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 BRICD5Q6PL45 260 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 FAM86B1Q8N7N1 296 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 SDR9C7Q8NEX9 313 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 MCUR1Q96AQ8 359 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 DMRTB1Q96MA1 342 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 TBX15Q96SF7 602 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 NSRP1Q9H0G5 558 aaKnown RBP17.84■□□□□ 0.45
CPNE1-220ENST00000458038 TNFRSF19Q9NS68 423 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 MRPL22Q9NWU5 206 aaKnown RBP17.84■□□□□ 0.45
CPNE1-220ENST00000458038 KAAG1Q9UBP8 84 aa17.84■□□□□ 0.45
CPNE1-220ENST00000458038 IGHV1-69DA0A0B4J2H0 117 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms