RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 FCARP24071 287 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 NTSP30990 170 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 XCR1P46094 333 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR3A4PP47883 348 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 LGALS7P47929 136 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 AGTR2P50052 363 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 EFNB2P52799 333 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 CLDN12P56749 244 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 TMPRSS3P57727 454 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 RPS15AP62244 130 aaKnown RBP4.73□□□□□ -1.65
VPS41-209ENST00000457055 CFHR1Q03591 330 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 PRKCDQ05655 676 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 CD300CQ08708 224 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 GPR17Q13304 367 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 NFATC4Q14934 902 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 KIR2DS1Q14954 304 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR1Q1Q15612 314 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 GABRA6Q16445 453 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 PRSS8Q16651 343 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 ZNF528Q3MIS6 628 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 PYCR3Q53H96 274 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 TMEM128Q5BJH2 165 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 FAM90A2PQ658T7 463 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 STEAP4Q687X5 459 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 LCTLQ6UWM7 567 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 LINC00299Q6ZSB3 139 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 MON1BQ7L1V2 547 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 MEPCEQ7L2J0 689 aaKnown RBP4.73□□□□□ -1.65
VPS41-209ENST00000457055 SLC29A4Q7RTT9 530 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 HAPLN4Q86UW8 402 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 TMPRSS12Q86WS5 348 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 APOBEC3FQ8IUX4 373 aaKnown RBP4.73□□□□□ -1.65
VPS41-209ENST00000457055 DHRSXQ8N5I4 330 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 CLDN19Q8N6F1 224 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 FITM2Q8N6M3 262 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 POC1AQ8NBT0 407 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 NPEPL1Q8NDH3 523 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR2Z1Q8NG97 314 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR56A4Q8NGH8 313 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR10V1Q8NGI7 309 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR6M1Q8NGM8 313 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR13C4Q8NGS5 318 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 SFXN5Q8TD22 340 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 ACER1Q8TDN7 264 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 ZFP90Q8TF47 636 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 DNASE2BQ8WZ79 361 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 MYLPFQ96A32 169 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 RPUSD4Q96CM3 377 aaKnown RBP4.73□□□□□ -1.65
VPS41-209ENST00000457055 NUS1Q96E22 293 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 MRPL53Q96EL3 112 aaKnown RBP4.73□□□□□ -1.65
VPS41-209ENST00000457055 MOCOSQ96EN8 888 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 SDSLQ96GA7 329 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 PYURFQ96I23 114 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 OR10C1Q96KK4 312 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 DEFB118Q96PH6 123 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 PNKPQ96T60 521 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 TBX5Q99593 518 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 DOK1Q99704 481 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 PECRQ9BY49 303 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 SLC29A3Q9BZD2 475 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 RBM38Q9H0Z9 239 aaKnown RBP4.73□□□□□ -1.65
VPS41-209ENST00000457055 DCSTAMPQ9H295 470 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 RDH14Q9HBH5 336 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 MED11Q9P086 117 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 LHX3Q9UBR4 397 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 LGALS13Q9UHV8 139 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 JPT1Q9UK76 154 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 YARS2Q9Y2Z4 477 aaKnown RBP4.73□□□□□ -1.65
VPS41-209ENST00000457055 MYH11P35749 1972 aa4.73□□□□□ -1.65
VPS41-209ENST00000457055 NEDD4P46934 1319 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 PSME4Q14997 1843 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 CACNA1BQ00975 2339 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 BAHCC1Q9P281 2608 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TRBV9A0A0B4J1U6 114 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 RPS10-NUDT3A0A1W2PQS6 291 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TCRBV7S2A1N4TA0A589 114 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ASPDHA6ND91 283 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 LRRC30A6NM36 301 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 CLDN24A6NM45 220 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SIGLEC16A6NMB1 481 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ZNF878C9JN71 531 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 F6UZH7 168 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ACOT8O14734 319 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 CDC40O60508 579 aaKnown RBP eCLIP4.72□□□□□ -1.65
VPS41-209ENST00000457055 LDB3O75112 727 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 ZNF780AO75290 641 aaPredicted RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 CRYAAP02489 173 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 OR13C7P0DN81 318 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 GPX2P18283 190 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 MPZP25189 248 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 DUSP1P28562 367 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 FGF9P31371 208 aaPredicted RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 RPL13AP40429 203 aaKnown RBP4.72□□□□□ -1.65
VPS41-209ENST00000457055 SULT1A1P50225 295 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 SULT1A2P50226 295 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 RAB5CP51148 216 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TDGF1P3P51864 188 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 TCL1AP56279 114 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 PIGPP57054 158 aa4.72□□□□□ -1.65
VPS41-209ENST00000457055 PROK1P58294 105 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms