RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 TMPRSS13Q9BYE2 586 aa17.86■□□□□ 0.45
HMGB3-205ENST00000455596 DNAJB9Q9UBS3 223 aa17.86■□□□□ 0.45
HMGB3-205ENST00000455596 MXRA5Q9NR99 2828 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 COL6A5A8TX70 2615 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 GLCEO94923 617 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 CYB5R3P00387 301 aaPredicted RBP17.85■□□□□ 0.45
HMGB3-205ENST00000455596 AVPP01185 164 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 OSMP13725 252 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 ANXA8P13928 327 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 SLC15A1P46059 708 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 RAD23AP54725 363 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 GRB2P62993 217 aaKnown RBP17.85■□□□□ 0.45
HMGB3-205ENST00000455596 ZNF92Q03936 586 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 GINS1Q14691 196 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 ZNF181Q2M3W8 571 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 C1orf229Q6ZS94 237 aaPredicted RBP17.85■□□□□ 0.45
HMGB3-205ENST00000455596 MOGAT3Q86VF5 341 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 ERI1Q8IV48 349 aaKnown RBP17.85■□□□□ 0.45
HMGB3-205ENST00000455596 HS3ST5Q8IZT8 346 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 CELF2-AS1Q8N7Q2 184 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 OR2AE1Q8NHA4 323 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 SLC22A4Q9H015 551 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 OCEL1Q9H607 264 aa17.85■□□□□ 0.45
HMGB3-205ENST00000455596 NOP16Q9Y3C1 178 aaKnown RBP17.85■□□□□ 0.45
HMGB3-205ENST00000455596 LOC105371242A0A075B767 164 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 IGHV3-64DA0A0J9YX35 117 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 GGT3PA6NGU5 568 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 LRRC30A6NM36 301 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 CD300LBA8K4G0 201 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 PRR23D1E9PI22 279 aaPredicted RBP17.84■□□□□ 0.45
HMGB3-205ENST00000455596 GSC2O15499 205 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 PRR23D2P0DMB1 279 aaPredicted RBP17.84■□□□□ 0.45
HMGB3-205ENST00000455596 PRKACGP22612 351 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 HSD11B1P28845 292 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 GSTT1P30711 240 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 BNIP1Q12981 228 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 OR8G1Q15617 311 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 GLYATL3Q5SZD4 288 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 SPATC1Q76KD6 591 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 DPY19L4Q7Z388 723 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 C1orf87Q8N0U7 546 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 C19orf24Q9BVV8 132 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 REPIN1Q9BWE0 567 aaKnown RBP17.84■□□□□ 0.45
HMGB3-205ENST00000455596 CADM1Q9BY67 442 aaKnown RBP17.84■□□□□ 0.45
HMGB3-205ENST00000455596 OR51V1Q9H2C8 321 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 TOR3AQ9H497 397 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 MARCH7Q9H992 704 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 N6AMT1Q9Y5N5 214 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 SVEP1Q4LDE5 3571 aa17.84■□□□□ 0.45
HMGB3-205ENST00000455596 PPIAL4EA0A075B759 164 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 PPIAL4CA0A0B4J2A2 164 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 PPIAL4DF5H284 164 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 XRCC2O43543 280 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 HMGN1P05114 100 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 PPIAL4FP0DN26 164 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 SLC2A1P11166 492 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 ANOS1P23352 680 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 ZFP36P26651 326 aaKnown RBP17.83■□□□□ 0.44
HMGB3-205ENST00000455596 CD200P41217 278 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 GATA4P43694 442 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 CDK5Q00535 292 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 MAB21L1Q13394 359 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 SHFQ7M4L6 423 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 C1QL2Q7Z5L3 287 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 ERGIC1Q969X5 290 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 ABHD6Q9BV23 337 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 OPA3Q9H6K4 179 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 C7orf69Q9H7B7 122 aa17.83■□□□□ 0.44
HMGB3-205ENST00000455596 C5orf63A6NC05 138 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 F5H0A9 414 aaPredicted RBP17.82■□□□□ 0.44
HMGB3-205ENST00000455596 IRF2P14316 349 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 CA6P23280 308 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 CX3CR1P49238 355 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 RASSF2P50749 326 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 SEC61A1P61619 476 aaKnown RBP17.82■□□□□ 0.44
HMGB3-205ENST00000455596 ESCO2Q56NI9 601 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 PLBD1Q6P4A8 553 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 NANPQ8TBE9 248 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 TEX12Q9BXU0 123 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 SP140LQ9H930 580 aa17.82■□□□□ 0.44
HMGB3-205ENST00000455596 POLR3KQ9Y2Y1 108 aaPredicted RBP17.82■□□□□ 0.44
HMGB3-205ENST00000455596 A0A0A6YYJ9 748 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 CEACAM18A8MTB9 384 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 A8MXK9 166 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 TBX1O43435 398 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 GMDSO60547 372 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 ZNF205O95201 554 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 FSTL3O95633 263 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 APOC1P02654 83 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 ANXA2P07355 339 aaKnown RBP17.81■□□□□ 0.44
HMGB3-205ENST00000455596 EPHA1P21709 976 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 CPT2P23786 658 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 PMELP40967 661 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 RHOUQ7L0Q8 258 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 TIGD4Q8IY51 512 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 OR11L1Q8NGX0 322 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 RNF133Q8WVZ7 376 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 DNAJC9Q8WXX5 260 aa17.81■□□□□ 0.44
HMGB3-205ENST00000455596 ZMYND19Q96E35 227 aaPredicted RBP17.81■□□□□ 0.44
HMGB3-205ENST00000455596 NRBF2Q96F24 287 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms