RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 TRAV36DV7A0A075B6V5 113 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 H7C1Q1 480 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 MBTPS2O43462 519 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 LY86O95711 162 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 OMGP23515 440 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 ASCL1P50553 236 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 ZNF345Q14585 488 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 TERB2Q8NHR7 220 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 TSLPQ969D9 159 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 NICN1Q9BSH3 213 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 TRBV5-7A0A0A0MS05 114 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 BORCS7-ASMTA0A0B4J1R7 106 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 ZNF850A8MQ14 1090 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 XRCC2O43543 280 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 ZNF205O95201 554 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 CD1AP06126 327 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 HNRNPA2B1P22626 353 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 ZSCAN4Q8NAM6 433 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 FAM213BQ8TBF2 198 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 LPAR3Q9UBY5 353 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 TBX21Q9UL17 535 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 MMP24Q9Y5R2 645 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 DUS4LO95620 317 aaKnown RBP12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 JMJD7P0C870 316 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 SLC25A4P12235 298 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 ADCYAP1P18509 176 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 BLVRBP30043 206 aaPredicted RBP12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 MGAT2Q10469 447 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 ZNF141Q15928 474 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 TMEM104Q8NE00 496 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 OR2I1PQ8NGU4 316 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 OR6S1Q8NH40 331 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 UNC13CQ8NB66 2214 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 HTTP42858 3142 aa12.42□□□□□ -0.42
UBE2D3-210ENST00000453744 DIRAS3O95661 229 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 S100A8P05109 93 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 ACY1Q03154 408 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 SSBP1Q04837 148 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 KIAA0141Q14154 515 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 STX12Q86Y82 276 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 UTP23Q9BRU9 249 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 SEC11CQ9BY50 192 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 LAT2Q9GZY6 243 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 PCDHGA1Q9Y5H4 931 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 EP300Q09472 2414 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 CELA2BP08218 269 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 GLP1RP43220 463 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 ATG4DQ86TL0 474 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 BHLHE23Q8NDY6 225 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 ASB13Q8WXK3 278 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 MCHR2Q969V1 340 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 JSRP1Q96MG2 331 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 ZNF426Q9BUY5 554 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 DENND4CQ5VZ89 1909 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 UMAD1C9J7I0 102 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 F5H5K5 113 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 ABHD16AO95870 558 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 ACAA1P09110 424 aaPredicted RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 CAV2P51636 162 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 SNU13P55769 128 aaKnown RBP12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 TFF2Q03403 129 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 ALG11Q2TAA5 492 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 C1orf140Q5VVS0 124 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 BIVMQ86UB2 503 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 SULF2Q8IWU5 870 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 KCNK7Q9Y2U2 307 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 C5orf42Q9H799 3197 aa12.41□□□□□ -0.42
UBE2D3-210ENST00000453744 A0A1W2PP11 408 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 EFSO43281 561 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 TMEM127O75204 238 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 CD1CP29017 333 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 CX3CR1P49238 355 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 DEFA6Q01524 100 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 CLEC18BQ6UXF7 455 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 MEX3BQ6ZN04 569 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 SGPP2Q8IWX5 399 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 ZNF561Q8N587 486 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 ARL5BQ96KC2 179 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 RAB33BQ9H082 229 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 R4GMQ9 66 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 IFNA17P01571 189 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 CD8AP01732 235 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 CLRN1P58418 232 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 FHL1Q13642 323 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 PRTGQ2VWP7 1150 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 SP6Q3SY56 376 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 MIDNQ504T8 468 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 AWAT1Q58HT5 328 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 OR13H1Q8NG92 308 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 OR9K2Q8NGE7 335 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 RNASE11Q8TAA1 199 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 RRNAD1Q96FB5 475 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 KLHDC3Q9BQ90 382 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 FLVCR1Q9Y5Y0 555 aa12.4□□□□□ -0.42
UBE2D3-210ENST00000453744 SOCS1O15524 211 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms