RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 MYRFQ9Y2G1 1151 aa12.54□□□□□ -0.4
VPS16-205ENST00000453689 PCDHGB5Q9Y5G0 923 aa12.54□□□□□ -0.4
VPS16-205ENST00000453689 DAPL1A0PJW8 107 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 PRR32B1ATL7 298 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 M0R135 149 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ZNF254O75437 659 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ABHD16AO95870 558 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 APOC1P02654 83 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 CSF3P09919 207 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 DCKP27707 260 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 MPV17P39210 176 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 TPTEP56180 551 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 SELENOVP59797 346 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 PPP1CBP62140 327 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ZNF85Q03923 595 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 ALKBH6Q3KRA9 238 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ZNF718Q3SXZ3 478 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 TMEM255AQ5JRV8 349 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 RBM48Q5RL73 367 aaKnown RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 AHSA2Q719I0 299 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 SSX6Q7RTT6 188 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 C1orf174Q8IYL3 243 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ZNF679Q8IYX0 411 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ZNF786Q8N393 782 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ZNF540Q8NDQ6 660 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 ABHD4Q8TB40 342 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 C10orf105Q8TEF2 133 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 SNX33Q8WV41 574 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 NEU4Q8WWR8 484 aaPredicted RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 MRPL48Q96GC5 212 aaKnown RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 ZNF799Q96GE5 643 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 TMEM80Q96HE8 168 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 MYCBPQ99417 103 aaPredicted RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 MROQ9BYG7 248 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 OR2J1Q9GZK6 312 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 NIPAL2Q9H841 368 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 FKBP14Q9NWM8 211 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 SLCO1C1Q9NYB5 712 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 BLOC1S6Q9UL45 172 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 DIMT1Q9UNQ2 313 aaKnown RBP12.53□□□□□ -0.4
VPS16-205ENST00000453689 TPRKBQ9Y3C4 175 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 LRRC42Q9Y546 428 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 LRP12Q9Y561 859 aa12.53□□□□□ -0.4
VPS16-205ENST00000453689 DYSFO75923 2080 aa12.52□□□□□ -0.4
VPS16-205ENST00000453689 A0A096LNT2 108 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 LY6G6DO95868 133 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 IGHV3-13P01766 116 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 KRT8P05787 483 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 ACSM4P0C7M7 580 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 NAT2P11245 290 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 CX3CR1P49238 355 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 RGS6P49758 472 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 PDLIM4P50479 330 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 PRKXP51817 358 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 RIDAP52758 137 aaKnown RBP12.52□□□□□ -0.41
VPS16-205ENST00000453689 ACTA2P62736 377 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 ACTG2P63267 376 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 GALEQ14376 348 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 NKPD1Q17RQ9 610 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 DRAM2Q6UX65 266 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 CLEC9AQ6UXN8 241 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 STX19Q8N4C7 294 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 KLF14Q8TD94 323 aaPredicted RBP12.52□□□□□ -0.41
VPS16-205ENST00000453689 POFUT1Q9H488 388 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 TBCCD1Q9NVR7 557 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 ERVK13-1Q9NX77 482 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 EXOSC1Q9Y3B2 195 aaKnown RBP12.52□□□□□ -0.41
VPS16-205ENST00000453689 GRIP1Q9Y3R0 1128 aa12.52□□□□□ -0.41
VPS16-205ENST00000453689 METTL15A6NJ78 407 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 H3BSA7 217 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 J3QW42 95 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 PSMD9O00233 223 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 SULT1C4O75897 302 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 MYL12AP19105 171 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 CRHBPP24387 322 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 GCH1P30793 250 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 DCTDP32321 178 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 PSMA6P60900 246 aaKnown RBP12.51□□□□□ -0.41
VPS16-205ENST00000453689 SLC35A2P78381 396 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 ST3GAL4Q11206 333 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 CARTPTQ16568 116 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 CDONQ4KMG0 1287 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 MBNL2Q5VZF2 373 aaKnown RBP12.51□□□□□ -0.41
VPS16-205ENST00000453689 PLEKHG7Q6ZR37 379 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 FAM220AQ7Z4H9 259 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 LHFPL3Q86UP9 236 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 ZNF283Q8N7M2 679 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 MYDGFQ969H8 173 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 ALG8Q9BVK2 526 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 C1QTNF5Q9BXJ0 243 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 MYOZ1Q9NP98 299 aaPredicted RBP12.51□□□□□ -0.41
VPS16-205ENST00000453689 CHCHD3Q9NX63 227 aaKnown RBP12.51□□□□□ -0.41
VPS16-205ENST00000453689 MRM2Q9UI43 246 aaKnown RBP12.51□□□□□ -0.41
VPS16-205ENST00000453689 GPR160Q9UJ42 338 aa12.51□□□□□ -0.41
VPS16-205ENST00000453689 LOC390937A0A1W2PQ73 354 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms