RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 MAPRE2Q15555 327 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 MPPED2Q15777 294 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 TEX36Q5VZQ5 186 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 BTN2A1Q7KYR7 527 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 CYP4Z1Q86W10 505 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 ADAT1Q9BUB4 502 aaKnown RBP11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 RERGLQ9H628 205 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 SMURF1Q9HCE7 757 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 UFSP2Q9NUQ7 469 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 C14orf119Q9NWQ9 140 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 GID8Q9NWU2 228 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 KCNG2Q9UJ96 466 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 SIGLEC7Q9Y286 467 aa11.78□□□□□ -0.52
LYSMD3-202ENST00000453259 ZNF816-ZNF321PA0A0X1KG74 233 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 DVL1O14640 695 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 FFAR1O14842 300 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 PTP4A3O75365 173 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 MUC1P15941 1255 aaPredicted RBP11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 ZNF26P17031 533 aaPredicted RBP11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 TPTEP56180 551 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 ARF6P62330 175 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 RSPO1Q2MKA7 263 aaPredicted RBP11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 LCE2DQ5TA82 110 aaPredicted RBP11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 PRAMEF6Q5VXH4 476 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 Q6ZPA2 131 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 LY6G5BQ8NDX9 201 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 SLC26A10Q8NG04 563 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 C12orf43Q96C57 262 aaKnown RBP11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 PITX2Q99697 317 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 WDR76Q9H967 626 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 RPS6KA6Q9UK32 745 aa11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 TET2Q6N021 2002 aaPredicted RBP11.77□□□□□ -0.53
LYSMD3-202ENST00000453259 IGLV1-36A0A0B4J1U3 117 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 CD300LBA8K4G0 201 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 IMPA2O14732 288 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 MRASO14807 208 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 LHBP01229 141 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 LCATP04180 440 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 CA6P23280 308 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 GABRA5P31644 462 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 GRK5P34947 590 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 MDH1P40925 334 aaKnown RBP11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 EGR3Q06889 387 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 TRAP1Q12931 704 aaKnown RBP11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 DGCR6Q14129 220 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 IFI44LQ53G44 452 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 SFRP4Q6FHJ7 346 aaPredicted RBP11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 SLC18B1Q6NT16 456 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 C1orf122Q6ZSJ8 110 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 SLC36A1Q7Z2H8 476 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 VMO1Q7Z5L0 202 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 TSEN54Q7Z6J9 526 aaKnown RBP11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 ARPINQ7Z6K5 226 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 FAM90A1Q86YD7 464 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 C19orf18Q8NEA5 215 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 OR2AJ1Q8NGZ0 328 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 SPTSSAQ969W0 71 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 SLCO4A1Q96BD0 722 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 RANBP3Q9H6Z4 567 aaPredicted RBP11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 RNPEPL1Q9HAU8 725 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 RHCGQ9UBD6 479 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 CYB5R1Q9UHQ9 305 aa11.76□□□□□ -0.53
LYSMD3-202ENST00000453259 ANKRD61A6NGH8 418 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 F5H5K5 113 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 M0R135 149 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 SOCS2O14508 198 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 XPNPEP2O43895 674 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 OR10H3O60404 316 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 PAHP00439 452 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 DDOSTP39656 456 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 ACSM1Q08AH1 577 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 MICBQ29980 383 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 NCR3LG1Q68D85 454 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 PTCHD4Q6ZW05 846 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 GCSAMQ8N6F7 178 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 OR4C15Q8NGM1 316 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 SLC7A13Q8TCU3 470 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 CFHR4Q92496 578 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 ZNF799Q96GE5 643 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 FAM234AQ9H0X4 552 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 RAB18Q9NP72 206 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 C1orf123Q9NWV4 160 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 PRPF19Q9UMS4 504 aaKnown RBP11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 IER3IP1Q9Y5U9 82 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 SNX13Q9Y5W8 968 aa11.75□□□□□ -0.53
LYSMD3-202ENST00000453259 G3V4G9 280 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 J3KTA2 159 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 NPFFO15130 113 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 ARPC3O15145 178 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 TIPRLO75663 272 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 RENP00797 406 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 OTX1P32242 354 aaPredicted RBP11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 GGT2P36268 569 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 CDKN2AP42771 156 aaKnown RBP11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 YAP1P46937 504 aaKnown RBP11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 CENPAP49450 140 aa11.74□□□□□ -0.53
LYSMD3-202ENST00000453259 AANATQ16613 207 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms