RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 WNT2P09544 360 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 FMO3P31513 532 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 CD200P41217 278 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 ENTPD1P49961 510 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 RAD23AP54725 363 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 PAX2Q02962 417 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF92Q03936 586 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF154Q13106 437 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 GK3PQ14409 553 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 ESCO2Q56NI9 601 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 TEX30Q5JUR7 227 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 LINC01590Q5TEZ4 76 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 MRPL21Q7Z2W9 205 aaKnown RBP10.45□□□□□ -0.74
CPSF4-208ENST00000452047 ADGRG5Q8IZF4 528 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF511Q8NB15 262 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 OR10G2Q8NGC3 310 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 OR2AE1Q8NHA4 323 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 Q8TCH9 128 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 CMC2Q9NRP2 79 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 INSIG2Q9Y5U4 225 aa10.45□□□□□ -0.74
CPSF4-208ENST00000452047 ARRDC5A6NEK1 342 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 CD300LBA8K4G0 201 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 PTBP3O95758 552 aaKnown RBP10.44□□□□□ -0.74
CPSF4-208ENST00000452047 IFNGP01579 166 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 RPS2P15880 293 aaKnown RBP10.44□□□□□ -0.74
CPSF4-208ENST00000452047 CPT2P23786 658 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 MPPED2Q15777 294 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF404Q494X3 552 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 KLF17Q5JT82 389 aaPredicted RBP10.44□□□□□ -0.74
CPSF4-208ENST00000452047 FAM201AQ5SY85 155 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 GLYATL3Q5SZD4 288 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 OR6K6Q8NGW6 343 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 FAM216AQ8WUB2 273 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 SPRYD4Q8WW59 207 aaPredicted RBP10.44□□□□□ -0.74
CPSF4-208ENST00000452047 ERGIC1Q969X5 290 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 DACT3Q96B18 629 aaPredicted RBP10.44□□□□□ -0.74
CPSF4-208ENST00000452047 SLAMF6Q96DU3 332 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 FEVQ99581 238 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 TMEM246Q9BRR3 403 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 COPS4Q9BT78 406 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 CHID1Q9BWS9 393 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 SSBP3Q9BWW4 388 aaPredicted RBP10.44□□□□□ -0.74
CPSF4-208ENST00000452047 SUCNR1Q9BXA5 334 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 ESM1Q9NQ30 184 aa10.44□□□□□ -0.74
CPSF4-208ENST00000452047 DHRS12A0PJE2 317 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 AQP12BA6NM10 295 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 LRRC30A6NM36 301 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 RIIAD1A6NNX1 92 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF878C9JN71 531 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF593O00488 134 aaPredicted RBP10.43□□□□□ -0.74
CPSF4-208ENST00000452047 FAM20BO75063 409 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 CST1P01037 141 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 SLC2A1P11166 492 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 ZNF3P17036 446 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 CA6P23280 308 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 PRKXP51817 358 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 BLVRAP53004 296 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 PAX8Q06710 450 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 PRAMEF6Q5VXH4 476 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 TMEM179BQ7Z7N9 219 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 KLBQ86Z14 1044 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 AQP12AQ8IXF9 295 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 C1orf87Q8N0U7 546 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 BPIFB2Q8N4F0 458 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 IQCF1Q8N6M8 205 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 ZDHHC22Q8N966 263 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 TEX47Q8TBZ9 253 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 GIPC3Q8TF64 312 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 CANT1Q8WVQ1 401 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 C22orf15Q8WYQ4 148 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 SPSB4Q96A44 273 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 LRGUKQ96M69 825 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 JMJD8Q96S16 334 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 KCNJ15Q99712 375 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 THTPAQ9BU02 230 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 ADAT1Q9BUB4 502 aaKnown RBP10.43□□□□□ -0.74
CPSF4-208ENST00000452047 SLC22A4Q9H015 551 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 MED20Q9H944 212 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 MARCH7Q9H992 704 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 MRPL15Q9P015 296 aaKnown RBP10.43□□□□□ -0.74
CPSF4-208ENST00000452047 MIOXQ9UGB7 285 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 OR5V1Q9UGF6 321 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 NOP16Q9Y3C1 178 aaKnown RBP10.43□□□□□ -0.74
CPSF4-208ENST00000452047 PPIAL4AQ9Y536 164 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 AUP1Q9Y679 476 aa10.43□□□□□ -0.74
CPSF4-208ENST00000452047 FAM183AA6NL82 134 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 TRIM77I1YAP6 450 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 HAX1O00165 279 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 GMDSO60547 372 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 CD80P33681 288 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 GRK5P34947 590 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 COMPP49747 757 aaPredicted RBP10.42□□□□□ -0.74
CPSF4-208ENST00000452047 HOXA4Q00056 320 aaPredicted RBP10.42□□□□□ -0.74
CPSF4-208ENST00000452047 OR8G1Q15617 311 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 ARMCX4Q5H9R4 360 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 OR56B2PQ8NGI1 322 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 NEIL1Q96FI4 390 aaPredicted RBP10.42□□□□□ -0.74
CPSF4-208ENST00000452047 MRI1Q9BV20 369 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 OPA3Q9H6K4 179 aa10.42□□□□□ -0.74
CPSF4-208ENST00000452047 CENPMQ9NSP4 180 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms