RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 LRP12Q9Y561 859 aa12.22□□□□□ -0.45
COL3A1-203ENST00000450867 C5orf63A6NC05 138 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 ACOD1A6NK06 481 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 RP2O75695 350 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 INHBBP09529 407 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 CRYBB2P43320 205 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 MAGEB1P43366 347 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 HCCSP53701 268 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 ZNF92Q03936 586 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 LPCAT4Q643R3 524 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 OR2T2Q6IF00 324 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 LRRN1Q6UXK5 716 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 SPATC1Q76KD6 591 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 SLC35F2Q8IXU6 374 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 ENTHD1Q8IYW4 607 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 ZNF679Q8IYX0 411 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 RDH5Q92781 318 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 SLC30A2Q9BRI3 323 aa12.21□□□□□ -0.45
COL3A1-203ENST00000450867 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
COL3A1-203ENST00000450867 J3QRE1 110 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 ENTPD6O75354 484 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 OR2T7P0C7T2 308 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 SLC2A1P11166 492 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 ACHEP22303 614 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 MTNR1AP48039 350 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF121P58317 390 aaPredicted RBP12.2□□□□□ -0.46
COL3A1-203ENST00000450867 CCL8P80075 99 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 EGR3Q06889 387 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 LOXL1Q08397 574 aaPredicted RBP12.2□□□□□ -0.46
COL3A1-203ENST00000450867 GLYATL3Q5SZD4 288 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF684Q5T5D7 378 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF322Q6U7Q0 402 aaPredicted RBP12.2□□□□□ -0.46
COL3A1-203ENST00000450867 USP51Q70EK9 711 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 PGAP1Q75T13 922 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 KRT77Q7Z794 578 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 BIVMQ86UB2 503 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.2□□□□□ -0.46
COL3A1-203ENST00000450867 RFLNBQ8N5W9 214 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF540Q8NDQ6 660 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 OR51G2Q8NGK0 314 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 OR2T27Q8NH04 317 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 ITFG2Q969R8 447 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 PIMREGQ9BSJ6 248 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 MROQ9BYG7 248 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 RGCCQ9H4X1 137 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 CHODLQ9H9P2 273 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 MSL2Q9HCI7 577 aa12.2□□□□□ -0.46
COL3A1-203ENST00000450867 RNF223E7ERA6 249 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF670-ZNF695F2Z2N8 137 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 SRSF10O75494 262 aaKnown RBP12.19□□□□□ -0.46
COL3A1-203ENST00000450867 CFL1P23528 166 aaKnown RBP12.19□□□□□ -0.46
COL3A1-203ENST00000450867 NR4A2P43354 598 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 MMP16P51512 607 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 CXCR4P61073 352 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 ADARB1P78563 741 aaKnown RBP12.19□□□□□ -0.46
COL3A1-203ENST00000450867 SLC34A1Q06495 639 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 LRRC36Q1X8D7 754 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 TTC23Q5W5X9 447 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 MRPL21Q7Z2W9 205 aaKnown RBP12.19□□□□□ -0.46
COL3A1-203ENST00000450867 GALNT4Q8N4A0 578 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF555Q8NEP9 628 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 OR13G1Q8NGZ3 307 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 OR2AE1Q8NHA4 323 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 YIPF5Q969M3 257 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 EGLN1Q9GZT9 426 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 SAP30LQ9HAJ7 183 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 RNPEPL1Q9HAU8 725 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 FAM206AQ9NX38 181 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF319Q9P2F9 582 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 NKX1-2Q9UD57 310 aaPredicted RBP12.19□□□□□ -0.46
COL3A1-203ENST00000450867 IL19Q9UHD0 177 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF391Q9UJN7 358 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
COL3A1-203ENST00000450867 NF1P21359 2839 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 A0A0U1RQV5 110 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 hCG_38984A0A1B0GV85 526 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 SNTNA6NMZ2 147 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 CD300LBA8K4G0 201 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 MLNRO43193 412 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 SPRY3O43610 288 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 LILRA1O75019 489 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 ANXA2P07355 339 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 TACSTD2P09758 323 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 TNFSF4P23510 183 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 COL8A2P25067 703 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 DDOSTP39656 456 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 RIDAP52758 137 aaKnown RBP12.18□□□□□ -0.46
COL3A1-203ENST00000450867 TMEM33P57088 247 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 ISL1P61371 349 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 OR8B8Q15620 311 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 ZNF691Q5VV52 312 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 FAM57BQ71RH2 274 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 KRT74Q7RTS7 529 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 SGK3Q96BR1 496 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 ELMOD3Q96FG2 381 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 Q96MT0 163 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 APOL4Q9BPW4 351 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 SLC22A4Q9H015 551 aa12.18□□□□□ -0.46
COL3A1-203ENST00000450867 OR10A2Q9H208 303 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms