RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 KLHDC8BQ8IXV7 354 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 PGAM4Q8N0Y7 254 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 DAW1Q8N136 415 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 OR5T1Q8NG75 326 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 OR8G5Q8NG78 346 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 OR2L5Q8NG80 312 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 OR10W1Q8NGF6 305 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 OR2L2Q8NH16 312 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 LRRC29Q8WV35 223 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 CPNE4Q96A23 557 aaPredicted RBP2.92□□□□□ -1.94
PMS1-216ENST00000447734 FLYWCH2Q96CP2 140 aaKnown RBP2.92□□□□□ -1.94
PMS1-216ENST00000447734 CMTM5Q96DZ9 223 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 WDR34Q96EX3 536 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 RNF145Q96MT1 663 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 SMIM14Q96QK8 99 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 VAT1Q99536 393 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 ARHGDIGQ99819 225 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 OPRPNQ99935 248 aaPredicted RBP2.92□□□□□ -1.94
PMS1-216ENST00000447734 C19orf24Q9BVV8 132 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 DEFB127Q9H1M4 99 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 DSN1Q9H410 356 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 ZDHHC11Q9H8X9 412 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 SLC25A22Q9H936 323 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 PANK3Q9H999 370 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 PLEKHJ1Q9NW61 149 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 CD274Q9NZQ7 290 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 APOBEC3BQ9UH17 382 aaKnown RBP2.92□□□□□ -1.94
PMS1-216ENST00000447734 FBXL3Q9UKT7 428 aa2.92□□□□□ -1.94
PMS1-216ENST00000447734 DENND4AQ7Z401 1863 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 FAM240AA0A1B0GVK7 77 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 A0A1B0GX12 115 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 SLC5A10A0PJK1 596 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 H3BNH8 94 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 CDIPTO14735 213 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 SULT1B1O43704 296 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 GALR3O60755 368 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 SHOX2O60902 331 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 ORM1P02763 201 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 SERPINA6P08185 405 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 ZP3P21754 424 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 MYL9P24844 172 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 ACTR1BP42025 376 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 CDKN2CP42773 168 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 OR3A4PP47883 348 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 TUFMP49411 452 aaKnown RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 OR12D2P58182 307 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 VSX2P58304 361 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 RHOAP61586 193 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 PPP1CBP62140 327 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 SLC35A1P78382 337 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 EGFEM1PQ0D2K5 195 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 STX5Q13190 355 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 TRAM1Q15629 374 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 TRIP13Q15645 432 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 GOLGA7BQ2TAP0 167 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 SLC36A2Q495M3 483 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 THEM4Q5T1C6 240 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 ZNF658Q5TYW1 1059 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 BAIAP2L2Q6UXY1 529 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 SLC25A42Q86VD7 318 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 TMEM61Q8N0U2 210 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 CYP4Z2PQ8N1L4 340 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 TMEM156Q8N614 296 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 OR10J6PQ8NGY7 276 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 OR2G3Q8NGZ4 309 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 ZNF488Q96MN9 340 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 DUX3Q96PT4 197 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 KIR2DL4Q99706 377 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 RASL11BQ9BPW5 248 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 C20orf144Q9BQM9 153 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 OR51B5Q9H339 312 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 METTL8Q9H825 291 aaKnown RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 RDH14Q9HBH5 336 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 ZDHHC4Q9NPG8 344 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 TRMT112Q9UI30 125 aaKnown RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 PRG3Q9Y2Y8 225 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 POLR3HQ9Y535 204 aaPredicted RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 WIF1Q9Y5W5 379 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 UBIAD1Q9Y5Z9 338 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 MRPS18BQ9Y676 258 aaKnown RBP2.91□□□□□ -1.94
PMS1-216ENST00000447734 LRRK1Q38SD2 2015 aa2.91□□□□□ -1.94
PMS1-216ENST00000447734 PLB1Q6P1J6 1458 aa2.9□□□□□ -1.94
PMS1-216ENST00000447734 CFAP65Q6ZU64 1925 aaKnown RBP2.9□□□□□ -1.95
PMS1-216ENST00000447734 IGKV2D-30A0A075B6S6 120 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 IGLV1-36A0A0B4J1U3 117 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 IGHV2OR16-5A0A0B4J2B6 119 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 KIR2DS1A0A191URI9 304 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 CIB4A0PJX0 185 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 GOLGA6L19H0YKK7 550 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 H7C417 338 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 SLC31A2O15432 143 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 ATP8B1O43520 1251 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 MPZL2O60487 215 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 CTNSO60931 367 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 RAB36O95755 333 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 CD8AP01732 235 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 THRAP10827 490 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 ERGP11308 486 aa2.9□□□□□ -1.95
PMS1-216ENST00000447734 ICAM2P13598 275 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms