RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 TRIM64A6NGJ6 449 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 TRIM64BA6NI03 449 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 H7C1Q1 480 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 SPRY3O43610 288 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ENTPD6O75354 484 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 IGHV1-46P01743 117 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 CD55P08174 381 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 INHBBP09529 407 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 TNFRSF1AP19438 455 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ACHEP22303 614 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 GIFP27352 417 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 PEX2P28328 305 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 DDOSTP39656 456 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 MAGEB1P43366 347 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 MTNR1AP48039 350 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 HCCSP53701 268 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF121P58317 390 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 PSMA6P60900 246 aaKnown RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 CXCR4P61073 352 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ACTC1P68032 377 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ACTA1P68133 377 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 EGR3Q06889 387 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 SNCBQ16143 134 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 TSTQ16762 297 aaKnown RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF829Q3KNS6 432 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 SNAI3Q3KNW1 292 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 OR2T2Q6IF00 324 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF322Q6U7Q0 402 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ENTHD1Q8IYW4 607 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 DHRSXQ8N5I4 330 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 SETD9Q8NE22 299 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 RHOXF1Q8NHV9 184 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 SPRYD4Q8WW59 207 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ITFG2Q969R8 447 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ELMOD3Q96FG2 381 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 MRPL48Q96GC5 212 aaKnown RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 COX4I2Q96KJ9 171 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 OR8B4Q96RC9 309 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
HDAC6-211ENST00000443563 RGCCQ9H4X1 137 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 CHODLQ9H9P2 273 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 MSL2Q9HCI7 577 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 TMEM100Q9NV29 134 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 IL19Q9UHD0 177 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 IKZF2Q9UKS7 526 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 KLHDC2Q9Y2U9 406 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 N6AMT1Q9Y5N5 214 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 ZANQ9Y493 2812 aa9.23□□□□□ -0.93
HDAC6-211ENST00000443563 IGHV1-69-2A0A0G2JMI3 117 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 TMEM269A0A1B0GVZ9 245 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 GGT3PA6NGU5 568 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 ZSCAN5BA6NJL1 495 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 RNF223E7ERA6 249 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 HPXP02790 462 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 KRT8P05787 483 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 SLC2A1P11166 492 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 CRYBB2P43320 205 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 NR4A2P43354 598 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 TMEM33P57088 247 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 TNFAIP6P98066 277 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-211ENST00000443563 ZNF92Q03936 586 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 SLC3A1Q07837 685 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 IL18R1Q13478 541 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 HFEQ30201 348 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 TMEM255AQ5JRV8 349 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 GLYATL3Q5SZD4 288 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 FAM57BQ71RH2 274 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 BIVMQ86UB2 503 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 OR5AS1Q8N127 324 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 FTMTQ8N4E7 242 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 OR2Z1Q8NG97 314 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 CYGBQ8WWM9 190 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 UBE2FQ969M7 185 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 SPSB4Q96A44 273 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 RNFT2Q96EX2 444 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 REEP6Q96HR9 211 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 SLC30A2Q9BRI3 323 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 VCX3BQ9H321 246 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 MOB1AQ9H8S9 216 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 RNPEPL1Q9HAU8 725 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 BRD7Q9NPI1 651 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 COPS3Q9UNS2 423 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 TANC2Q9HCD6 1990 aa9.22□□□□□ -0.93
HDAC6-211ENST00000443563 CD300LBA8K4G0 201 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 VWC2LB2RUY7 222 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 H0YAE9 185 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 IFNL4K9M1U5 179 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 DLGAP1O14490 977 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 SMAD7O15105 426 aaKnown RBP9.21□□□□□ -0.94
HDAC6-211ENST00000443563 GMDSO60547 372 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 SULT1C4O75897 302 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 NCR1O76036 304 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 GABRB1P18505 474 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 SRP9P49458 86 aaKnown RBP9.21□□□□□ -0.94
HDAC6-211ENST00000443563 MMP16P51512 607 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 IL5RAQ01344 420 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 LOXL1Q08397 574 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-211ENST00000443563 MZT1Q08AG7 82 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 KLHL22Q53GT1 634 aa9.21□□□□□ -0.94
HDAC6-211ENST00000443563 ZNF691Q5VV52 312 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms