RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ACSM2BQ68CK6 577 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 PVRIGQ6DKI7 326 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 SLC35E3Q7Z769 313 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 ISCA2Q86U28 154 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 FAM185AQ8N0U4 392 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 GRK7Q8WTQ7 553 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 APIPQ96GX9 242 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 CLUHP3Q96NS8 147 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 CCDC115Q96NT0 180 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 OR5B12Q96R08 314 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 ELOVL1Q9BW60 279 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 ALX4Q9H161 411 aaPredicted RBP5.35□□□□□ -1.55
SSXP3-201ENST00000442971 WNT5BQ9H1J7 359 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 OR51J1Q9H342 316 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 ZNF446Q9NWS9 450 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 C1orf123Q9NWV4 160 aa5.35□□□□□ -1.55
SSXP3-201ENST00000442971 CHCHD3Q9NX63 227 aaKnown RBP5.35□□□□□ -1.55
SSXP3-201ENST00000442971 SLC25A10Q9UBX3 287 aaPredicted RBP5.35□□□□□ -1.55
SSXP3-201ENST00000442971 FAF1Q9UNN5 650 aaPredicted RBP5.35□□□□□ -1.55
SSXP3-201ENST00000442971 MTO1Q9Y2Z2 717 aaKnown RBP5.35□□□□□ -1.55
SSXP3-201ENST00000442971 IGHG2P01859 326 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 BRS3P32247 399 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 MAGEA3P43357 314 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 MAGEA6P43360 314 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 WHAMMP3Q1A5X7 153 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 SPDYE7PQ495Y7 208 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 GGTA1PQ4G0N0 100 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 ATG16L1Q676U5 607 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 ZNF782Q6ZMW2 699 aaPredicted RBP5.34□□□□□ -1.55
SSXP3-201ENST00000442971 ZNF826PQ6ZT77 177 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 NUDCD3Q8IVD9 361 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 RNF141Q8WVD5 230 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 UBE2E2Q96LR5 201 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 COG8Q96MW5 612 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 NEURL2Q9BR09 285 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 GON7Q9BXV9 100 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 FAM107BQ9H098 131 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 WFDC10AQ9H1F0 79 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 CAB39LQ9H9S4 337 aa5.34□□□□□ -1.55
SSXP3-201ENST00000442971 TNXBP22105 4242 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 A0A096LPI6 279 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 hCG_1809904A0A1W2PP81 198 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 A0A1W2PPE2 198 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 A0A1W2PR64 198 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 A0A1W2PRV1 198 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 LINC01548A6NM66 108 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 IQCF6A8MYZ5 107 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 C11orf94C9JXX5 98 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 LINC01619G3V211 115 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 IFNA10P01566 189 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 KRT16P08779 473 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ETFAP13804 333 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 HSD3B1P14060 373 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 GFAPP14136 432 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 UQCRBP14927 111 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 NQO1P15559 274 aaKnown RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 NCK1P16333 377 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 CTRB1P17538 263 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 GRPRP30550 384 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ALDH18A1P54886 795 aaKnown RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 BIDP55957 195 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 CAV3P56539 151 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 GNG11P61952 73 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ERVK-25P63136 954 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 DYNC1I2Q13409 638 aaKnown RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 PCK2Q16822 640 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 HSP90B2PQ58FF3 399 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 SPANXN3Q5MJ09 141 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 BEND6Q5SZJ8 279 aaPredicted RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ATPAF1Q5TC12 328 aaPredicted RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 MINOS1Q5TGZ0 78 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 FAM219BQ5XKK7 198 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 CTRB2Q6GPI1 263 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 FBXW12Q6X9E4 464 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 KCTD8Q6ZWB6 473 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ZNF767PQ75MW2 155 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 CCDC80Q76M96 950 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 TMEM139Q8IV31 216 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ADPRHL1Q8NDY3 354 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 OR4F6Q8NGB9 312 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 OR4M1Q8NGD0 313 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 TMEM163Q8TC26 289 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 OIT3Q8WWZ8 545 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 UBXN10Q96LJ8 280 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 OR7D2Q96RA2 312 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 GGTLC1Q9BX51 225 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 OR2H1Q9GZK4 316 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 VIPAS39Q9H9C1 493 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 SIAEQ9HAT2 523 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ELL3Q9HB65 397 aaPredicted RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 MED4Q9NPJ6 270 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 CPSF2Q9P2I0 782 aaKnown RBP5.33□□□□□ -1.56
SSXP3-201ENST00000442971 RAB21Q9UL25 225 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 VSIG4Q9Y279 399 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 NDUFAF1Q9Y375 327 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 MOB4Q9Y3A3 225 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 WSB1Q9Y6I7 421 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 MINOS1-NBL1R4GNA1 71 aa5.33□□□□□ -1.56
SSXP3-201ENST00000442971 HSPE1-MOB4S4R3N1 261 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms