RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 FTMTQ8N4E7 242 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 PROKR2Q8NFJ6 384 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 SLC26A10Q8NG04 563 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 Q8TCH9 128 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 FAM71F1Q96KD3 344 aaPredicted RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 NMNAT3Q96T66 252 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 MAGIXQ9H6Y5 334 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 TMEM165Q9HC07 324 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ABCB9Q9NP78 766 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 NOX4Q9NPH5 578 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 RPRD1BQ9NQG5 326 aaKnown RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 RNF7Q9UBF6 113 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 OPN4Q9UHM6 478 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 CYB5R1Q9UHQ9 305 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 CDH10Q9Y6N8 788 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 KIR2DS1A0A191URI9 304 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ANKRD30BLA7E2S9 258 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 CEACAM18A8MTB9 384 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 M0R135 149 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 P2RY10O00398 339 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 PHYHO14832 338 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 SPRY1O43609 319 aaPredicted RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 CCNB2O95067 398 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ZNF26P17031 533 aaPredicted RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 NAA10P41227 235 aaPredicted RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 PITPNBP48739 271 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 TAGLNQ01995 201 aaKnown RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 SEC23BQ15437 767 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ZNF404Q494X3 552 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 FAM98BQ52LJ0 330 aaKnown RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 TEX30Q5JUR7 227 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ZNF362Q5T0B9 420 aaPredicted RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 RASSF6Q6ZTQ3 369 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 C9orf139Q6ZV77 190 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 SHFQ7M4L6 423 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 MOGAT3Q86VF5 341 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 PNLDC1Q8NA58 520 aaKnown RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 SLCO4A1Q96BD0 722 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ZNF799Q96GE5 643 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 DMRTB1Q96MA1 342 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 KCNJ15Q99712 375 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 FUZQ9BT04 418 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ZNF747Q9BV97 191 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 FAM107BQ9H098 131 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 ZNF446Q9NWS9 450 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 MRPL15Q9P015 296 aaKnown RBP6.53□□□□□ -1.36
CD44-211ENST00000442151 ACTR3BQ9P1U1 418 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 LHFPL6Q9Y693 200 aa6.53□□□□□ -1.36
CD44-211ENST00000442151 FBN1P35555 2871 aaKnown RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 IGHV2-70DA0A0C4DH43 119 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 A0A1B0GWJ7 208 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 RIIAD1A6NNX1 92 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 TRAPPC2LH3BP13 241 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 TIPRLO75663 272 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 DIRAS1O95057 198 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 DBHP09172 617 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 PAICSP22234 425 aaKnown RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 ZFP36P26651 326 aaKnown RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 SLC25A1P53007 311 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 GK2Q14410 553 aaPredicted RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 HLXQ14774 488 aaPredicted RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 PDCD1Q15116 288 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 KRTAP27-1Q3LI81 207 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 GPR157Q5UAW9 335 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 ZNF620Q6ZNG0 422 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 RHOUQ7L0Q8 258 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 TMEM86BQ8N661 226 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 SIGLECL1Q8N7X8 197 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 ZDHHC22Q8N966 263 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 DEFB108BQ8NET1 73 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 OR2T33Q8NG76 320 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 SLC7A6Q92536 515 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 DVL3Q92997 716 aaPredicted RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 UPRTQ96BW1 309 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 LRGUKQ96M69 825 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 SIGLEC11Q96RL6 698 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 NUDT16L1Q9BRJ7 211 aaKnown RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 TMEM246Q9BRR3 403 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 COPS4Q9BT78 406 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 YY1AP1Q9H869 796 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 REEP1Q9H902 201 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 TBC1D23Q9NUY8 699 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 IL20Q9NYY1 176 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 CAB39Q9Y376 341 aaPredicted RBP6.52□□□□□ -1.37
CD44-211ENST00000442151 MXRA5Q9NR99 2828 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 DYSFO75923 2080 aa6.52□□□□□ -1.37
CD44-211ENST00000442151 CD300LBA8K4G0 201 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 LGALS8O00214 317 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 ARPC2O15144 300 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 SEMG1P04279 462 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 RNASE1P07998 156 aaKnown RBP6.51□□□□□ -1.37
CD44-211ENST00000442151 ZNF3P17036 446 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 HSD11B1P28845 292 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 ENTPD1P49961 510 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 AWAT1Q58HT5 328 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 CORO6Q6QEF8 472 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 ZNF771Q7L3S4 317 aaPredicted RBP6.51□□□□□ -1.37
CD44-211ENST00000442151 DHFR2Q86XF0 187 aa6.51□□□□□ -1.37
CD44-211ENST00000442151 DEFB107AQ8IZN7 70 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms