RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PRDM14Q9GZV8 571 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 C11orf54Q9H0W9 315 aaPredicted RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 SCPEP1Q9HB40 452 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SLC7A10Q9NS82 523 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 TBC1D24Q9ULP9 559 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SLC7A11Q9UPY5 501 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 A0A0B4J203 849 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 A0A1B0GTI1 187 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 A0A1B0GVC2 190 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 AHRRA9YTQ3 701 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 XRCC3O43542 346 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 RBBP9O75884 186 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ALX3O95076 343 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SLC2A1P11166 492 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 HOXB1P14653 301 aaPredicted RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 OTX1P32242 354 aaPredicted RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 PRSS3P35030 304 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ZNF93P35789 620 aaPredicted RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 OR3A2P47893 321 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 RAB25P57735 213 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ACTBP60709 375 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 UBE2NP61088 152 aaKnown RBP5.29□□□□□ -1.56
VPS50-205ENST00000441602 ACTG1P63261 375 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 C2orf76Q3KRA6 126 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ZNF774Q6NX45 483 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ANKRD16Q6P6B7 361 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 UTS2BQ765I0 119 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ZNF101Q8IZC7 436 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 PLPP7Q8NBV4 271 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SEMA6DQ8NFY4 1073 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 WNT2BQ93097 391 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 SPSB1Q96BD6 273 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 ITPKCQ96DU7 683 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 CST11Q9H112 138 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 LIPGQ9Y5X9 500 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 CDH23Q9H251 3354 aa5.29□□□□□ -1.56
VPS50-205ENST00000441602 DOCK10Q96BY6 2186 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SYNGR3O43761 229 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SS18L1O75177 396 aaPredicted RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 CHRM2P08172 466 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 HOXD4P09016 255 aaPredicted RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 CSF1P09603 554 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 FREM3P0C091 2139 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 CD79AP11912 226 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 GABRA1P14867 456 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 FAPQ12884 760 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SRSF6Q13247 344 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 ZBTB37Q5TC79 503 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 FBXW9Q5XUX1 488 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 AWAT2Q6E213 333 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 RPUSD3Q6P087 351 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 NRARPQ7Z6K4 114 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 AKAP14Q86UN6 197 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 FTMTQ8N4E7 242 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 OR5L1Q8NGL2 311 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 OR14K1Q8NGZ2 314 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 KCNG3Q8TAE7 436 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 FBXO17Q96EF6 278 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 TRIB1Q96RU8 372 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 GFI1Q99684 422 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 ACTR6Q9GZN1 396 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 WNT5BQ9H1J7 359 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SPRR3Q9UBC9 169 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 CGGBP1Q9UFW8 167 aaPredicted RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 MRPS28Q9Y2Q9 187 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 NUBP2Q9Y5Y2 271 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 PCSK5Q92824 1860 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 TRAV18A0A075B6X5 111 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 CIB4A0PJX0 185 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 KDM4BO94953 1096 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 CNOT4O95628 575 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 TRAPPC2P0DI81 140 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 TRAPPC2BP0DI82 140 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 PRF1P14222 555 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 WT1P19544 449 aaPredicted RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 CRYGSP22914 178 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 CDK2P24941 298 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 AGTR1P30556 359 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 GSK3AP49840 483 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 BTG1P62324 171 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 PMP22Q01453 160 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 RNASE12Q5GAN4 147 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 PABPC1L2AQ5JQF8 200 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 FAM180AQ6UWF9 173 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 UNQ6126/PRO20091Q6UXV3 157 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 ZNF627Q7L945 461 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SKA3Q8IX90 412 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 AKR7LQ8NHP1 331 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SLC39A7Q92504 469 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 SLC25A38Q96DW6 304 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 REEP6Q96HR9 211 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 MOV10Q9HCE1 1003 aaKnown RBP5.28□□□□□ -1.56
VPS50-205ENST00000441602 ETAA1Q9NY74 926 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 V9GYS6 101 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 BDP1A6H8Y1 2624 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 GGT3PA6NGU5 568 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 INMT-MINDY4F8WBC2 141 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 CRHP06850 196 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 ITGA5P08648 1049 aa5.28□□□□□ -1.56
VPS50-205ENST00000441602 CD3GP09693 182 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms