RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 HCCSP53701 268 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 HNRNPA0Q13151 305 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 MEPCEQ7L2J0 689 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 MRPL21Q7Z2W9 205 aaKnown RBP13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 BHLHE23Q8NDY6 225 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 OR10AD1Q8NGE0 317 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 ITLN1Q8WWA0 313 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 SPSB4Q96A44 273 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 OR2V2Q96R30 315 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 IL4I1Q96RQ9 567 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 RIBC2Q9H4K1 309 aa13.48□□□□□ -0.25
TRAPPC12-209ENST00000441099 LOC100289279A0A1B0GTE1 492 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 CD300LBA8K4G0 201 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 E9PQ18 207 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 EI24O14681 340 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 CRLF1O75462 422 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 APOC1P02654 83 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 H2BFMP0C1H6 154 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 TNFRSF1AP19438 455 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 RBMXP38159 391 aaKnown RBP13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 LMO4P61968 165 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 MVKQ03426 396 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 AVPI1Q5T686 147 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 LCN1P1Q5VSP4 162 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 NXNL2Q5VZ03 156 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 MEGF10Q96KG7 1140 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 NARFLQ9H6Q4 476 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 TMEM100Q9NV29 134 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 DCAF16Q9NXF7 216 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 LAMP5Q9UJQ1 280 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 WIPI2Q9Y4P8 454 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 N6AMT1Q9Y5N5 214 aa13.47□□□□□ -0.25
TRAPPC12-209ENST00000441099 C2CD3Q4AC94 2353 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 NAV3Q8IVL0 2385 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 MRPL3P09001 348 aaKnown RBP13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 ALDH3A2P51648 485 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 ZNF121P58317 390 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 SLC3A1Q07837 685 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 LRRN1Q6UXK5 716 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 FAM57BQ71RH2 274 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 PQLC1Q8N2U9 271 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 CBR4Q8N4T8 237 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 SPRYD4Q8WW59 207 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 SGK3Q96BR1 496 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 OPA3Q9H6K4 179 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 SP140LQ9H930 580 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 TMEM106BQ9NUM4 274 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 DNAJC27Q9NZQ0 273 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 ZNF319Q9P2F9 582 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 COPS3Q9UNS2 423 aa13.46□□□□□ -0.25
TRAPPC12-209ENST00000441099 SLC22A31A6NKX4 558 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 PRR32B1ATL7 298 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 F5H5P2 479 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 XRCC2O43543 280 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 HLA-DPB1P04440 258 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 ANXA2P07355 339 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 CDH15P55291 814 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 FAM166AQ6J272 317 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 LINC01356Q8N9X3 169 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 OR52H1Q8NGJ2 320 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 RAB1CQ92928 201 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 TIMD4Q96H15 378 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 CNN2Q99439 309 aaKnown RBP13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 NIPAL2Q9H841 368 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 GCM1Q9NP62 436 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 HAO2Q9NYQ3 351 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 H2AFY2Q9P0M6 372 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 PPP1R3CQ9UQK1 317 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 SVEP1Q4LDE5 3571 aa13.45□□□□□ -0.26
TRAPPC12-209ENST00000441099 GGT3PA6NGU5 568 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 TBX1O43435 398 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 LMX1BO60663 402 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 TGFAP01135 160 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 CA6P23280 308 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 SRP9P49458 86 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 FAM3AP98173 230 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 ROM1Q03395 351 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 MAB21L1Q13394 359 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 DEGS2Q6QHC5 323 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 GID4Q8IVV7 300 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 OR56B2PQ8NGI1 322 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 OR8J1Q8NGP2 316 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 ASB17Q8WXJ9 295 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 REEP6Q96HR9 211 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 SIGLEC11Q96RL6 698 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 SLC29A1Q99808 456 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 OR10A2Q9H208 303 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 ADGRL4Q9HBW9 690 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 BRD7Q9NPI1 651 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 MRPL15Q9P015 296 aaKnown RBP13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 LRP12Q9Y561 859 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 NPTNQ9Y639 398 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 TMEM14AQ9Y6G1 99 aa13.44□□□□□ -0.26
TRAPPC12-209ENST00000441099 hCG_38984A0A1B0GV85 526 aa13.43□□□□□ -0.26
TRAPPC12-209ENST00000441099 FAM157AC9JC47 383 aa13.43□□□□□ -0.26
TRAPPC12-209ENST00000441099 PSMD9O00233 223 aa13.43□□□□□ -0.26
TRAPPC12-209ENST00000441099 IGHV2-70P01814 119 aa13.43□□□□□ -0.26
TRAPPC12-209ENST00000441099 HTR1FP30939 366 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms