RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 RPS27P42677 84 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 MAP2K4P45985 399 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF133P52736 654 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 HCCSP53701 268 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 FOXG1P55316 489 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RAP1BP61224 184 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RPS3AP61247 264 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RAP1AP62834 184 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 CSNK2BP67870 215 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF85Q03923 595 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ST3GAL4Q11206 333 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RIN1Q13671 783 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RAB35Q15286 201 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 GUSBP1Q15486 140 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF672Q499Z4 452 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 KLHL12Q53G59 568 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 SLC35D3Q5M8T2 416 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 AGAP6Q5VW22 663 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 FAM205BPQ63HN1 556 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 XAF1Q6GPH4 301 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TMEM154Q6P9G4 183 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF474Q6S9Z5 364 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 SSX6Q7RTT6 188 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 AAED1Q7RTV5 226 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 NUFIP2Q7Z417 695 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ADCK1Q86TW2 530 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 GID4Q8IVV7 300 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TIGD4Q8IY51 512 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 C20orf196Q8IYI0 205 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 SPARTQ8N0X7 666 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TEX29Q8N6K0 151 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF525Q8N782 197 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 CNEP1R1Q8N9A8 125 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 SYT14Q8NB59 555 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF540Q8NDQ6 660 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TSPAN14Q8NG11 270 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 OR4F15Q8NGB8 312 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 OR51G2Q8NGK0 314 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 NSMAFQ92636 917 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 HTRA1Q92743 480 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TMEM45BQ96B21 275 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TMIGD2Q96BF3 282 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 STARD4Q96DR4 205 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RNFT2Q96EX2 444 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 SLC25A44Q96H78 314 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 Q96MT0 163 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 COPS4Q9BT78 406 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ALG12Q9BV10 488 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TEX12Q9BXU0 123 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 NDEL1Q9GZM8 345 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RACGAP1Q9H0H5 632 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 SLITRK2Q9H156 845 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 MMP27Q9H306 513 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 METTL17Q9H7H0 456 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 WDR76Q9H967 626 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 MARCH7Q9H992 704 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RNF122Q9H9V4 155 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 BCO1Q9HAY6 547 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ADGRL4Q9HBW9 690 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 FGF20Q9NP95 211 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TIGARQ9NQ88 270 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 MRPL22Q9NWU5 206 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 PAQR5Q9NXK6 330 aaPredicted RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 HAO2Q9NYQ3 351 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 CNOT2Q9NZN8 540 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 WARS2Q9UGM6 360 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 CLEC2DQ9UHP7 191 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 MCTS1Q9ULC4 181 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 COPS3Q9UNS2 423 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RCE1Q9Y256 329 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 EXOGQ9Y2C4 368 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 KLHDC2Q9Y2U9 406 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 TPRKBQ9Y3C4 175 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 RPL36Q9Y3U8 105 aaKnown RBP4.11□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF175Q9Y473 711 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 UGT2A1Q9Y4X1 527 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 FKBP7Q9Y680 259 aa4.11□□□□□ -1.75
PTPN4-206ENST00000441089 A0A087WXM4 84 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 SLC22A20A6NK97 555 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 ZNF724A8MTY0 619 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 M0R3G1 203 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 XKRYO14609 159 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 MAGEB4O15481 346 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 DHHO43323 396 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 RGS10O43665 173 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 AHCYL1O43865 530 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 MRPS14O60783 128 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 SS18L1O75177 396 aaPredicted RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 KHDRBS3O75525 346 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 RAB36O95755 333 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 FADS2O95864 444 aaKnown RBP4.1□□□□□ -1.75
PTPN4-206ENST00000441089 PTHP01270 115 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 CD8AP01732 235 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 IGHG1P01857 330 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 LCKP06239 509 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 QDPRP09417 244 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 LIMS3P0CW19 117 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 LIMS4P0CW20 117 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 HKR1P10072 659 aa4.1□□□□□ -1.75
PTPN4-206ENST00000441089 PAICSP22234 425 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms