RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 RP2O75695 350 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 APOL3O95236 402 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 LY6G6DO95868 133 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 ACHEP22303 614 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 GIFP27352 417 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 HTR1FP30939 366 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 TNFAIP6P98066 277 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-205ENST00000440514 KRTAP1-1Q07627 177 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 CDK5R2Q13319 367 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 RIN1Q13671 783 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 CLEC9AQ6UXN8 241 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 FAM57BQ71RH2 274 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 PGAP1Q75T13 922 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 PRSS45Q7RTY3 260 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 KRT77Q7Z794 578 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-205ENST00000440514 GALNT4Q8N4A0 578 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 OR8G5Q8NG78 346 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 OR10AD1Q8NGE0 317 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 ELMOD3Q96FG2 381 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 MYCBPQ99417 103 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-205ENST00000440514 MNTQ99583 582 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 ZNF275Q9NSD4 429 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-205ENST00000440514 AASSQ9UDR5 926 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 WARS2Q9UGM6 360 aaKnown RBP15.32■□□□□ 0.04
CPSF4-205ENST00000440514 ZDHHC8Q9ULC8 765 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 GMPPBQ9Y5P6 360 aa15.32■□□□□ 0.04
CPSF4-205ENST00000440514 TANC2Q9HCD6 1990 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 IGHV4-61A0A0C4DH41 118 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 IGHV1-69-2A0A0G2JMI3 117 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 CD55P08174 381 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 PSMA6P60900 246 aaKnown RBP15.31■□□□□ 0.04
CPSF4-205ENST00000440514 LOXL1Q08397 574 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-205ENST00000440514 GFOD2Q3B7J2 385 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 MEDAGQ5VYS4 303 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 ZNF555Q8NEP9 628 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 DIRC2Q96SL1 478 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 TBX5Q99593 518 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 CHODLQ9H9P2 273 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 HAO2Q9NYQ3 351 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 TREM2Q9NZC2 230 aa15.31■□□□□ 0.04
CPSF4-205ENST00000440514 H0YL77 283 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 DLGAP1O14490 977 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 MLNRO43193 412 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 XRCC2O43543 280 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 ENTPD6O75354 484 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 SBK2P0C263 348 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 SELEP16581 610 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 USF1P22415 310 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-205ENST00000440514 RBMXP38159 391 aaKnown RBP15.3■□□□□ 0.04
CPSF4-205ENST00000440514 CXCR4P61073 352 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 ELF3P78545 371 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-205ENST00000440514 MRPS11P82912 194 aaKnown RBP15.3■□□□□ 0.04
CPSF4-205ENST00000440514 POU4F2Q12837 409 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 KCTD18Q6PI47 426 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-205ENST00000440514 PGAM5Q96HS1 289 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 Q96MT0 163 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 OR8B4Q96RC9 309 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 EGLN1Q9GZT9 426 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 FAM118AQ9NWS6 357 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 CLN6Q9NWW5 311 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 SMPD3Q9NY59 655 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-205ENST00000440514 ZNF319Q9P2F9 582 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 IKZF2Q9UKS7 526 aa15.3■□□□□ 0.04
CPSF4-205ENST00000440514 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.3■□□□□ 0.04
CPSF4-205ENST00000440514 GGT3PA6NGU5 568 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 ZNF670-ZNF695F2Z2N8 137 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 PHYHO14832 338 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 MAGEB4O15481 346 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-205ENST00000440514 HEXAP06865 529 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 CRYBB2P43320 205 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 GPR6P46095 362 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-205ENST00000440514 SNRPGP62308 76 aaKnown RBP15.29■□□□□ 0.04
CPSF4-205ENST00000440514 TIGD6Q17RP2 521 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 ZNF322Q6U7Q0 402 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-205ENST00000440514 SSX6Q7RTT6 188 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 ENTHD1Q8IYW4 607 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 SPRYD4Q8WW59 207 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-205ENST00000440514 ITLN1Q8WWA0 313 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 ASB17Q8WXJ9 295 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 REEP6Q96HR9 211 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 APOL4Q9BPW4 351 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 SLC30A2Q9BRI3 323 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 REPIN1Q9BWE0 567 aaKnown RBP15.29■□□□□ 0.04
CPSF4-205ENST00000440514 NIPAL2Q9H841 368 aa15.29■□□□□ 0.04
CPSF4-205ENST00000440514 MTORP42345 2549 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 LOC100130705A0A1B0GUX0 176 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 LRP5LA4QPB2 252 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 CD300LBA8K4G0 201 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 F5H5P2 479 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 PPIHO43447 177 aaKnown RBP15.28■□□□□ 0.04
CPSF4-205ENST00000440514 HLA-DPB1P04440 258 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 TNFSF4P23510 183 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 ROM1Q03395 351 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 TMEM249Q2WGJ8 235 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 SLC25A30Q5SVS4 291 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 AVPI1Q5T686 147 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 DEGS2Q6QHC5 323 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 ZNF540Q8NDQ6 660 aa15.28■□□□□ 0.04
CPSF4-205ENST00000440514 OR8B12Q8NGG6 310 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms